RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 DCXRQ7Z4W1 244 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 LRRTM1Q86UE6 522 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 TMEM219Q86XT9 240 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 LINC00346Q8IVM7 164 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PRSS35Q8N3Z0 413 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SLC22A24Q8N4F4 322 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 WDSUB1Q8N9V3 476 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 NOXO1Q8NFA2 376 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 OR13C3Q8NGS6 347 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 OR6N1Q8NGY5 312 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 OR6F1Q8NGZ6 308 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 GRPEL2Q8TAA5 225 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SYNPRQ8TBG9 265 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ST7LQ8TDW4 575 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CCDC107Q8WV48 283 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SECTM1Q8WVN6 248 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ZNRF4Q8WWF5 429 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PP6455Q8WZ26 134 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 C11orf40Q8WZ69 217 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SLC7A6Q92536 515 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CPNE4Q96A23 557 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 FAM3DQ96BQ1 224 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SLAMF6Q96DU3 332 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 GMPPAQ96IJ6 420 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 ARL5BQ96KC2 179 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 TSSK2Q96PF2 358 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SCGB3A2Q96PL1 93 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 TECTBQ96PL2 329 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 OR5B2Q96R09 309 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SLC25A21Q9BQT8 299 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 URM1Q9BTM9 101 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 GON7Q9BXV9 100 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CHIAQ9BZP6 476 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 RTN4RQ9BZR6 473 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 OR11A1Q9GZK7 315 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PBOV1Q9GZY1 135 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ALX4Q9H161 411 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 MED28Q9H204 178 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 RGCCQ9H4X1 137 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 RANBP3Q9H6Z4 567 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 CHMP1AQ9HD42 196 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 CENPMQ9NSP4 180 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 MRPL22Q9NWU5 206 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 GLTPQ9NZD2 209 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 MTFP1Q9UDX5 166 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 NUFIP1Q9UHK0 495 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 FBXL3Q9UKT7 428 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 RAB22AQ9UL26 194 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 COPS3Q9UNS2 423 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SLC22A13Q9Y226 551 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 POLR1DQ9Y2S0 133 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 RBMX2Q9Y388 322 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 ZNF175Q9Y473 711 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ARHGAP32A7KAX9 2087 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 WNK2Q9Y3S1 2297 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 IGHV4OR15-8A0A075B7B6 117 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 PIGBOS1A0A0B4J2F0 54 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 A0A0U1RQV5 110 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ZNF816-ZNF321PA0A0X1KG74 233 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ANKRD20A5PA0PJZ0 165 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 C7orf66A4D0T2 115 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SRRM5B3KS81 715 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 PRAC2D3DTV9 90 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ATP6V1G2-DDX39BF2Z307 99 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 TMEM178BH3BS89 294 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 BOLA2-SMG1P6H3BVE0 249 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 H7C1C5 153 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 MAGEB4O15481 346 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 TRAF3IP2O43734 574 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 EFNA2O43921 213 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ZNF780AO75290 641 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 FARS2O95363 451 aaKnown RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 SYNGR4O95473 234 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 CYB5AP00167 134 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 PAHP00439 452 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 C1QBP02746 253 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OPN1LWP04000 364 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 MAS1P04201 325 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SNRNP70P08621 437 aaKnown RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 CST2P09228 141 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 AKAIN1P0CW23 69 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ANXA3P12429 323 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 HLA-DOBP13765 273 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SPNP16150 400 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 IGFBP3P17936 291 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 CCL1P22362 96 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 PRKACBP22694 351 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 S100A1P23297 94 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 KIR3DL2P43630 455 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 CBX5P45973 191 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 FUT6P51993 359 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 CLDN17P56750 224 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR10A3P58181 314 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 TAS2R19P59542 299 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 TAS2R20P59543 309 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 GMFBP60983 142 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 RRAS2P62070 204 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 LCN6P62502 163 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 HIST1H3AP68431 136 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 LCN2P80188 198 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms