RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 NKX1-2Q9UD57 310 aaPredicted RBP5.88□□□□□ -1.47
ZEB1-223ENST00000561304 PSORS1C1Q9UIG5 152 aa5.88□□□□□ -1.47
ZEB1-223ENST00000561304 SLC31A2O15432 143 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 CSTBP04080 98 aaKnown RBP5.87□□□□□ -1.47
ZEB1-223ENST00000561304 MAS1P04201 325 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 BRS3P32247 399 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 CEACAM3P40198 252 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 REG1BP48304 166 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 KCNJ3P48549 501 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 PRRX1P54821 245 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 LOXL3P58215 753 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 CD83Q01151 205 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 C9orf152Q5JTZ5 239 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 ATAD3CQ5T2N8 411 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 FAM27D1Q5T7N8 215 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 GLIPR1L1Q6UWM5 242 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 ZNF497Q6ZNH5 498 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 C8orf59Q8N0T1 100 aaPredicted RBP5.87□□□□□ -1.47
ZEB1-223ENST00000561304 JAGN1Q8N5M9 183 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 ZNF565Q8N9K5 539 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 TMEM104Q8NE00 496 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 BPIFB6Q8NFQ5 453 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 CAPSLQ8WWF8 208 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 RPEQ96AT9 228 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 BARHL1Q9BZE3 327 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 KCNK15Q9H427 330 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 BANF2Q9H503 90 aa5.87□□□□□ -1.47
ZEB1-223ENST00000561304 PAK1IP1Q9NWT1 392 aaPredicted RBP5.87□□□□□ -1.47
ZEB1-223ENST00000561304 CNOT2Q9NZN8 540 aaKnown RBP5.87□□□□□ -1.47
ZEB1-223ENST00000561304 RCC2Q9P258 522 aaKnown RBP5.87□□□□□ -1.47
ZEB1-223ENST00000561304 MRPS28Q9Y2Q9 187 aaKnown RBP5.87□□□□□ -1.47
ZEB1-223ENST00000561304 IGHV3-72A0A0B4J1Y9 119 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 TMEM30CPA0ZSE6 113 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 EFCAB10A6NFE3 127 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 OOSP1A8MZH6 123 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 C12orf77C9JDV5 145 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 AIPO00170 330 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 HSD17B6O14756 317 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 MYL12BO14950 172 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 IGKV1D-33P01593 117 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 IGKV1-33P01594 117 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 CELP19835 753 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 WNT4P56705 351 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 MADCAM1Q13477 382 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 HNF4GQ14541 408 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 MLANAQ16655 118 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 MPV17LQ2QL34 196 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 AWAT2Q6E213 333 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 SIGIRRQ6IA17 410 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 Q6ZPA2 131 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 C18orf65Q6ZTR6 163 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 LINC00596Q86U02 117 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 NANOGP1Q8N7R0 232 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 C5orf56Q8N8D9 126 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 ZNF439Q8NDP4 499 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 NEK7Q8TDX7 302 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 NRG4Q8WWG1 115 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 TFAP2CQ92754 450 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 MYDGFQ969H8 173 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 FAM46BQ96A09 425 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 CREB3L1Q96BA8 519 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 PHF21AQ96BD5 680 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 NOL4LQ96MY1 436 aaPredicted RBP5.86□□□□□ -1.47
ZEB1-223ENST00000561304 C8orf4Q9NR00 106 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 PLCXD1Q9NUJ7 323 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 CHCHD3Q9NX63 227 aaKnown RBP5.86□□□□□ -1.47
ZEB1-223ENST00000561304 GFOD1Q9NXC2 390 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 LINC00527Q9UJ94 153 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 LSM2Q9Y333 95 aaKnown RBP5.86□□□□□ -1.47
ZEB1-223ENST00000561304 MOB4Q9Y3A3 225 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 AMMECR1Q9Y4X0 333 aaPredicted RBP5.86□□□□□ -1.47
ZEB1-223ENST00000561304 HSPE1-MOB4S4R3N1 261 aa5.86□□□□□ -1.47
ZEB1-223ENST00000561304 IGHV1-3A0A0C4DH29 117 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 LINC01548A6NM66 108 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 ZNF736B4DX44 427 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-223ENST00000561304 SDCBPO00560 298 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-223ENST00000561304 MT-ND4P03905 459 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 CDK1P06493 297 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 GTF2F2P13984 249 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 IGLL1P15814 213 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 MGMTP16455 207 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 TMEM11P17152 192 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 RCC1P18754 421 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-223ENST00000561304 MNDAP41218 407 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 ARHGDIBP52566 201 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 ZNF134P52741 427 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 AQP4P55087 323 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 TAS2R43P59537 309 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 ZNF816Q0VGE8 651 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-223ENST00000561304 HES1Q14469 280 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 GNMTQ14749 295 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 OR10K2Q6IF99 312 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 RAB12Q6IQ22 244 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 CCDC144NLQ6NUI1 221 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 ETV3LQ6ZN32 361 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 CENPVQ7Z7K6 275 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-223ENST00000561304 ZNF329Q86UD4 541 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 LRRTM1Q86UE6 522 aa5.85□□□□□ -1.47
ZEB1-223ENST00000561304 THNSL2Q86YJ6 484 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms