RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 RGS10O43665 173 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 ZNF780AO75290 641 aaPredicted RBP10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 HBZP02008 142 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 HSMCR30P0CW71 290 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 CD37P11049 281 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 MAPK3P27361 379 aaPredicted RBP10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 CHATP28329 748 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 HTR2CP28335 458 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 ZNF134P52741 427 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 PRRX1P54821 245 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 TPBGQ13641 420 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 P2RY14Q15391 338 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 C6orf201Q7Z4U5 140 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 CDH26Q8IXH8 852 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 PRR18Q8N4B5 295 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 ST6GALNAC6Q969X2 333 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 UQCC2Q9BRT2 126 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 HDHD3Q9BSH5 251 aaPredicted RBP10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 SCN3BQ9NY72 215 aa10.06□□□□□ -0.8
CHRNA3-208ENST00000561128 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 TMEM14DPA8MWL7 114 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 MCRIP1C9JLW8 97 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 PDCD6O75340 191 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 ATP6V1G2O95670 118 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 IGKV1D-33P01593 117 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 IGKV1-33P01594 117 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 CEACAM3P40198 252 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 CLDN12P56749 244 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 MADCAM1Q13477 382 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 GPR176Q14439 515 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 HNF4GQ14541 408 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 HSD17B12Q53GQ0 312 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 CT45A1Q5HYN5 189 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 NKAPLQ5M9Q1 402 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 C11orf88Q6PI97 169 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 C5orf56Q8N8D9 126 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 OR52L2PQ8NGH6 319 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 CT45A3Q8NHU0 189 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 PHYHIPQ92561 330 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 UFD1Q92890 307 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 MRPS24Q96EL2 167 aaKnown RBP10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 CCDC90BQ9GZT6 254 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 PARP12Q9H0J9 701 aaKnown RBP10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 MBNL3Q9NUK0 354 aaKnown RBP10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 TRAPPC2LQ9UL33 140 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 TPRKBQ9Y3C4 175 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 AMMECR1Q9Y4X0 333 aaPredicted RBP10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
CHRNA3-208ENST00000561128 IGHV1-3A0A0C4DH29 117 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 LINC01548A6NM66 108 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 OOSP1A8MZH6 123 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 ORC5O43913 435 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 PRB2P02812 416 aaPredicted RBP10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 CPEP16870 476 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 SRMP19623 302 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 FUT3P21217 361 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 BRS3P32247 399 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 RPS27AP62979 156 aaKnown RBP10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 ZNF816Q0VGE8 651 aaPredicted RBP10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 MLLT11Q13015 90 aaPredicted RBP10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 PRSS48Q7RTY5 328 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 MS4A15Q8N5U1 240 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 Q8N6K4 173 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 OR10A7Q8NGE5 316 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 OR10X1Q8NGY0 326 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 NOL4LQ96MY1 436 aaPredicted RBP10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 MGLLQ99685 303 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 FAAP24Q9BTP7 215 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 LPAR5Q9H1C0 372 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 AK6Q9Y3D8 172 aaKnown RBP10.04□□□□□ -0.8
CHRNA3-208ENST00000561128 FAM90A10PA6NDY2 464 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 FAM90A7PA6NKC0 464 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 FOXI3A8MTJ6 420 aaPredicted RBP10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 FAM90A23PA8MXZ1 464 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 CCRL2O00421 344 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 SOCS1O15524 211 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 OPN1MWP04001 364 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 OPN1MW2P0DN77 364 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 OPN1MW3P0DN78 364 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 TMEM11P17152 192 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 GZMHP20718 246 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 PPP1CCP36873 323 aaKnown RBP10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 MNDAP41218 407 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 OR10A3P58181 314 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 CD83Q01151 205 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 TBCEQ15813 527 aaPredicted RBP10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 PDLIM3Q53GG5 364 aaPredicted RBP10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 ARSJQ5FYB0 599 aaPredicted RBP10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 C9orf152Q5JTZ5 239 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 CCDC144NLQ6NUI1 221 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 C16orf82Q7Z2V1 217 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 ODF3L1Q8IXM7 274 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 LINC00311Q8N616 119 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 OR5AU1Q8NGC0 362 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 OR52M1Q8NGK5 317 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 RTN4IP1Q8WWV3 396 aaPredicted RBP10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 TM2D1Q9BX74 207 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms