RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 CREB3L1Q96BA8 519 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 GALMQ96C23 342 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 GINS4Q9BRT9 223 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 BPESC1Q9GZL8 116 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 C19orf12Q9NSK7 152 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 LPAR3Q9UBY5 353 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 LINC00312Q9Y6C7 94 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 CSMD2Q7Z408 3487 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 hADV38S2A0JD32 116 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 NDUFS8O00217 210 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 FCGR2CP31995 323 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 AADACL3Q5VUY0 350 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 OR1L1Q8NH94 360 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 UBALD1Q8TB05 177 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 FAM168AQ92567 244 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 ARL11Q969Q4 196 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 ZNF2Q9BSG1 426 aaPredicted RBP10.08□□□□□ -0.8
HERC1-205ENST00000559886 C20orf85Q9H1P6 137 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 UBE2J1Q9Y385 318 aaPredicted RBP10.08□□□□□ -0.8
HERC1-205ENST00000559886 SPINT2O43291 252 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 NPY4RP50391 375 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 WDR25Q64LD2 544 aaPredicted RBP10.07□□□□□ -0.8
HERC1-205ENST00000559886 CLEC2AQ6UVW9 174 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 OR10J5Q8NHC4 309 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 C10orf105Q8TEF2 133 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
HERC1-205ENST00000559886 TMPRSS13Q9BYE2 586 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 NARFLQ9H6Q4 476 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 LINC00574Q9H8X3 128 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 BEX4Q9NWD9 120 aaPredicted RBP10.07□□□□□ -0.8
HERC1-205ENST00000559886 CLN8Q9UBY8 286 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 TRAV6A0A075B6T7 132 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 TRBV23-1A0A0A0MS06 115 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 KBTBD11-OT1A0A1B0GTJ5 212 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 A0A1B0GVG6 124 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 OR5H14A6NHG9 310 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 TUSC2O75896 110 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 HEXAP06865 529 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 NFYAP23511 347 aaPredicted RBP10.07□□□□□ -0.8
HERC1-205ENST00000559886 IL2RGP31785 369 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 C17orf58Q2M2W7 97 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 TMEM200BQ69YZ2 307 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 PIMREGQ9BSJ6 248 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 TAS2R3Q9NYW6 316 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 CALYQ9NYX4 217 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 SLC23A1Q9UHI7 598 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 FLVCR2Q9UPI3 526 aa10.07□□□□□ -0.8
HERC1-205ENST00000559886 ASH1LQ9NR48 2969 aaKnown RBP10.07□□□□□ -0.8
HERC1-205ENST00000559886 ZNF729A6NN14 1252 aaPredicted RBP10.06□□□□□ -0.8
HERC1-205ENST00000559886 VWC2LB2RUY7 222 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 INMT-MINDY4F8WBC2 141 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 DNASE1P24855 282 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 RAG2P55895 527 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 HTD2P86397 168 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 H1FOOQ8IZA3 346 aaPredicted RBP10.06□□□□□ -0.8
HERC1-205ENST00000559886 RFESDQ8TAC1 157 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 RAB9BQ9NP90 201 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 OR1A1Q9P1Q5 309 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 ARHGAP32A7KAX9 2087 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 F2RL2O00254 374 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 ARPC1BO15143 372 aaKnown RBP10.06□□□□□ -0.8
HERC1-205ENST00000559886 PPYP01298 95 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 IGHV2-5P01817 119 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 AADACP22760 399 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 ZBTB25P24278 435 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 DSCR9P59020 149 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 ZNF273Q14593 569 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 ZDHHC22Q8N966 263 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 MARCH1Q8TCQ1 289 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 MOB3AQ96BX8 217 aa10.06□□□□□ -0.8
HERC1-205ENST00000559886 HSPA12AO43301 675 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 ECI1P42126 302 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 GNB2P62879 340 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 SURF2Q15527 256 aaPredicted RBP10.05□□□□□ -0.8
HERC1-205ENST00000559886 DEFB113Q30KQ7 82 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 C11orf91Q3C1V1 193 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 C8orf46Q8TAG6 207 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 SSBP3Q9BWW4 388 aaPredicted RBP10.05□□□□□ -0.8
HERC1-205ENST00000559886 TOLLIPQ9H0E2 274 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 VSIG4Q9Y279 399 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 NAV2Q8IVL1 2488 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 PEX14O75381 377 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 FPR2P25090 351 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 CEACAM6P40199 344 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
HERC1-205ENST00000559886 RAB25P57735 213 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 LOXL3P58215 753 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 LMO4P61968 165 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 FAM185AQ8N0U4 392 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 LRRC75A-AS1Q8N1F1 130 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 OR52L2PQ8NGH6 319 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 CLDND2Q8NHS1 167 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 MBD6Q96DN6 1003 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 ZNF714Q96N38 554 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 SCGB3A2Q96PL1 93 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 GAL3ST2Q9H3Q3 398 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 OR2S2Q9NQN1 319 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 ZNF69Q9UC07 566 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 RPUSD1Q9UJJ7 312 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms