RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 OR1A1Q9P1Q5 309 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 PAIP2BQ9ULR5 123 aaKnown RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 MAB21L2Q9Y586 359 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 COL6A6A6NMZ7 2263 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 C5orf51A6NDU8 294 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 LRRC30A6NM36 301 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 FAM25EA8MYX2 175 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 OR5AC1P0C628 307 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 IRF2P14316 349 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 CR1LQ2VPA4 569 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 TRAT1Q6PIZ9 186 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 ZNF561Q8N587 486 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 GLYATL2Q8WU03 294 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 PPP1R1CQ8WVI7 109 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 GALMQ96C23 342 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 MSI2Q96DH6 328 aaKnown RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 SAP30LQ9HAJ7 183 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 CISD1Q9NZ45 108 aaKnown RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 C13orf42A0A1B0GVH6 325 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 SLC25A4P12235 298 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 CXCL2P19875 107 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 GNLYP22749 145 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 CEACAM6P40199 344 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 IL15RAQ13261 267 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 SWI5Q1ZZU3 235 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 ZNF672Q499Z4 452 aaPredicted RBP10.59□□□□□ -0.71
USP3-213ENST00000559711 LIAT1Q6ZQX7 453 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 TGIF2LYQ8IUE0 185 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 PRR18Q8N4B5 295 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 ZNRF1Q8ND25 227 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 BVESQ8NE79 360 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 OR10V1Q8NGI7 309 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 OR5D13Q8NGL4 314 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 OR13A1Q8NGR1 328 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 OR1L1Q8NH94 360 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 METTL8Q9H825 291 aaKnown RBP10.59□□□□□ -0.71
USP3-213ENST00000559711 CCL28Q9NRJ3 127 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 RDH8Q9NYR8 311 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 ROS1P08922 2347 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 RELNP78509 3460 aa10.59□□□□□ -0.71
USP3-213ENST00000559711 C3orf85A0A1B0GTC6 90 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 ODAMA1E959 279 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 HSPA12AO43301 675 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 HBZP02008 142 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 HOXB5P09067 269 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 WNT2P09544 360 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 GZMHP20718 246 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 UQCRFS1P47985 274 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 LUMP51884 338 aaPredicted RBP10.58□□□□□ -0.72
USP3-213ENST00000559711 SP6Q3SY56 376 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 ZNF788Q6ZQV5 615 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 TBC1D26Q86UD7 250 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 CMTM1Q8IZ96 169 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 TPRX1Q8N7U7 411 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 MRGPRDQ8TDS7 321 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 OR10C1Q96KK4 312 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 C2orf50Q96LR7 162 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 DYNLRB1Q9NP97 96 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 DCAF16Q9NXF7 216 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 COMMD9Q9P000 198 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 ICE1Q9Y2F5 2266 aa10.58□□□□□ -0.72
USP3-213ENST00000559711 FXYD6-FXYD2A0A087WZ82 144 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 MPTX1A8MV57 137 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 C15orf65H3BRN8 121 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 TMEM178BH3BS89 294 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 LGALS8O00214 317 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 PGLYRP1O75594 196 aaPredicted RBP10.57□□□□□ -0.72
USP3-213ENST00000559711 CLDN14O95500 239 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 PSMB6P28072 239 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 IL2RGP31785 369 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 P2RX3P56373 397 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 HTD2P86397 168 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 C1orf87Q8N0U7 546 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 LGI3Q8N145 548 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 UBALD1Q8TB05 177 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 ITLN2Q8WWU7 325 aaPredicted RBP10.57□□□□□ -0.72
USP3-213ENST00000559711 AKR1E2Q96JD6 320 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 C18orf12Q96KH6 178 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 TMEM56Q96MV1 263 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 GAFA1Q96PS6 74 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 TMEM222Q9H0R3 208 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 FAM234AQ9H0X4 552 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 ZNF665Q9H7R5 613 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 HEXA-AS1Q9H8Q6 139 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 TMEM56-RWDD3S4R434 201 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 CFAP46Q8IYW2 2715 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 L7N2F9 121 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 HSD17B6O14756 317 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 PHF1O43189 567 aaPredicted RBP10.57□□□□□ -0.72
USP3-213ENST00000559711 SPINT2O43291 252 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 MPC2O95563 127 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 IFNA21P01568 189 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 IGLV2-14P01704 120 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 RPA2P15927 270 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 C4BPBP20851 252 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 S100GP29377 79 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 SSTR2P30874 369 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms