RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MOB1BQ7L9L4 216 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 LYG2Q86SG7 212 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 TMEM230Q96A57 120 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 C9orf170A2RU37 121 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 TFF1P04155 84 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 SCTP09683 121 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 CTXN2P0C2S0 81 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 ANXA3P12429 323 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 PPP1R1AQ13522 171 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 HERPUD1Q15011 391 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 IGSF11Q5DX21 431 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 CD177Q8N6Q3 437 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 DRAXINQ8NBI3 349 aaPredicted RBP13.74□□□□□ -0.21
TPM1-219ENST00000559397 OR2AK2Q8NG84 335 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 MBNL3Q9NUK0 354 aaKnown RBP13.74□□□□□ -0.21
TPM1-219ENST00000559397 MGAT4AQ9UM21 535 aa13.74□□□□□ -0.21
TPM1-219ENST00000559397 MAP1AP78559 2803 aaPredicted RBP13.74□□□□□ -0.21
TPM1-219ENST00000559397 IGKV1-6A0A0C4DH72 117 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 C1QBP02746 253 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 RCC1P18754 421 aaPredicted RBP13.73□□□□□ -0.21
TPM1-219ENST00000559397 FCGR2CP31995 323 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 PRDX2P32119 198 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 GLP1RP43220 463 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 OR3A1P47881 315 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 UCP3P55916 312 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 HLA-DRB3P79483 266 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 PAX5Q02548 391 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 KCNJ8Q15842 424 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 TMEM128Q5BJH2 165 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 SLC35E4Q6ICL7 350 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 ZNF788Q6ZQV5 615 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 C12orf45Q8N5I9 185 aaPredicted RBP13.73□□□□□ -0.21
TPM1-219ENST00000559397 OR4A4PQ8NGN8 299 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 MOB3AQ96BX8 217 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 CABLES2Q9BTV7 478 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 ZNF436Q9C0F3 470 aaPredicted RBP13.73□□□□□ -0.21
TPM1-219ENST00000559397 FXYD6Q9H0Q3 95 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 DNTTIP1Q9H147 329 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 MGAT4CQ9UBM8 478 aa13.73□□□□□ -0.21
TPM1-219ENST00000559397 NDUFA2O43678 99 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 ZNF737O75373 536 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 HLA-AP01891 365 aaKnown RBP13.72□□□□□ -0.21
TPM1-219ENST00000559397 CTSDP07339 412 aaPredicted RBP13.72□□□□□ -0.21
TPM1-219ENST00000559397 SLC25A16P16260 332 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 COL10A1Q03692 680 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 ATXN7L3Q14CW9 347 aaPredicted RBP13.72□□□□□ -0.21
TPM1-219ENST00000559397 LYPD2Q6UXB3 125 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 C5orf24Q7Z6I8 188 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 MITD1Q8WV92 249 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 SDSLQ96GA7 329 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 CCL13Q99616 98 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 TMPRSS13Q9BYE2 586 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 A0A096LNT2 108 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 TMEM30CPA0ZSE6 113 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 TUSC2O75896 110 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 OR2A4O95047 310 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 DUS4LO95620 317 aaKnown RBP13.72□□□□□ -0.21
TPM1-219ENST00000559397 PGAM2P15259 253 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 RPS2P15880 293 aaKnown RBP13.72□□□□□ -0.21
TPM1-219ENST00000559397 AKR1C4P17516 323 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 GABRA2P47869 451 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 GZMKP49863 264 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 NOTCH2Q04721 2471 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 BAMBIQ13145 260 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 C2orf68Q2NKX9 166 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 NOXA1Q86UR1 476 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 CCDC168Q8NDH2 2452 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 GAFA1Q96PS6 74 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 OR2A7Q96R45 310 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 SHARPINQ9H0F6 387 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 PIPOXQ9P0Z9 390 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 KAAG1Q9UBP8 84 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 PCDHB10Q9UN67 800 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 MAB21L2Q9Y586 359 aa13.72□□□□□ -0.21
TPM1-219ENST00000559397 SETXQ7Z333 2677 aaKnown RBP13.71□□□□□ -0.21
TPM1-219ENST00000559397 IGHV4-61A0A0C4DH41 118 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 A0A1B0GW55 424 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 NPIPB11E5RHQ5 1161 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 TK1P04183 234 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4L2P0CJ85 424 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4L3P0CJ86 424 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4L4P0CJ87 422 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4L5P0CJ88 424 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4L6P0CJ89 424 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4L7P0CJ90 424 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 HLA-GP17693 338 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 PI3P19957 117 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 AADACP22760 399 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 NKX2-5P52952 324 aaPredicted RBP13.71□□□□□ -0.21
TPM1-219ENST00000559397 SUPT4H1P63272 117 aaKnown RBP13.71□□□□□ -0.21
TPM1-219ENST00000559397 IL13RA1P78552 427 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 HMGN3Q15651 99 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4L9Q6RFH8 374 aaPredicted RBP13.71□□□□□ -0.21
TPM1-219ENST00000559397 NLRC3Q7RTR2 1065 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 COQ2Q96H96 371 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 Q96MF0 132 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 NARFLQ9H6Q4 476 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms