RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TMEM30BQ3MIR4 351 aa17.67■□□□□ 0.42
SNX1-206ENST00000559389 HACD4Q5VWC8 232 aa17.67■□□□□ 0.42
SNX1-206ENST00000559389 FOXB2Q5VYV0 432 aa17.67■□□□□ 0.42
SNX1-206ENST00000559389 PIP4P2Q8N4L2 257 aa17.67■□□□□ 0.42
SNX1-206ENST00000559389 OR11H6Q8NGC7 330 aa17.67■□□□□ 0.42
SNX1-206ENST00000559389 Q9N2K0 584 aa17.67■□□□□ 0.42
SNX1-206ENST00000559389 KCNIP1Q9NZI2 227 aa17.67■□□□□ 0.42
SNX1-206ENST00000559389 SPINT2O43291 252 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 HLA-DRB3P79483 266 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 LTC4SQ16873 150 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 ZNF626Q68DY1 528 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 IZUMO1Q8IYV9 350 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 BCL6BQ8N143 479 aaPredicted RBP17.66■□□□□ 0.42
SNX1-206ENST00000559389 OR1L1Q8NH94 360 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 SETD6Q8TBK2 473 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 C22orf15Q8WYQ4 148 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 CLEC7AQ9BXN2 247 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 ZNF286AQ9HBT8 521 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 MGAT4AQ9UM21 535 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 KIAA2026Q5HYC2 2103 aa17.66■□□□□ 0.42
SNX1-206ENST00000559389 A0A1W2PRD5 423 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 A0A1W2PRF3 423 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 A0A1W2PRM7 423 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 FAM172BPA6NC97 362 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 ELK1P19419 428 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 DTYMKP23919 212 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 NFYBP25208 207 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 SAA4P35542 130 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 TAS2R20P59543 309 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 MIDNQ504T8 468 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 TMEM69Q5SWH9 247 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 UTF1Q5T230 341 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 OR52M1Q8NGK5 317 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 NUDCD2Q8WVJ2 157 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 SLC6A7Q99884 636 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 DCUN1D5Q9BTE7 237 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 AUNIPQ9H7T9 357 aa17.65■□□□□ 0.42
SNX1-206ENST00000559389 SOX21Q9Y651 276 aaPredicted RBP17.65■□□□□ 0.42
SNX1-206ENST00000559389 ANK3Q12955 4377 aaKnown RBP17.65■□□□□ 0.42
SNX1-206ENST00000559389 SDCBPO00560 298 aaPredicted RBP17.64■□□□□ 0.41
SNX1-206ENST00000559389 MELTFP08582 738 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 LOXL3P58215 753 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 GNG2P59768 71 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 PITPNAQ00169 270 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 ABHD12Q8N2K0 398 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 PRR18Q8N4B5 295 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 DGCR14Q96DF8 476 aaKnown RBP17.64■□□□□ 0.41
SNX1-206ENST00000559389 NXF2Q9GZY0 626 aaKnown RBP17.64■□□□□ 0.41
SNX1-206ENST00000559389 MIXL1Q9H2W2 232 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 GFOD1Q9NXC2 390 aa17.64■□□□□ 0.41
SNX1-206ENST00000559389 SSX5O60225 188 aa17.63■□□□□ 0.41
SNX1-206ENST00000559389 TALDO1P37837 337 aa17.63■□□□□ 0.41
SNX1-206ENST00000559389 C5orf24Q7Z6I8 188 aa17.63■□□□□ 0.41
SNX1-206ENST00000559389 LAX1Q8IWV1 398 aa17.63■□□□□ 0.41
SNX1-206ENST00000559389 DTX3Q8N9I9 347 aa17.63■□□□□ 0.41
SNX1-206ENST00000559389 A0A0U1RQK1 487 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 FAM25AB3EWG3 89 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 FAM25CB3EWG5 89 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 FAM25GB3EWG6 89 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 CTDSP2O14595 271 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 RGS5O15539 181 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 ARG1P05089 322 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 MNDAP41218 407 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 HTD2P86397 168 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 SRSF7Q16629 238 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNX1-206ENST00000559389 FAM53AQ6NSI3 398 aaPredicted RBP17.62■□□□□ 0.41
SNX1-206ENST00000559389 Q6ZS49 121 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 OR9G1Q8NH87 305 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 MCFD2Q8NI22 146 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 LEAP2Q969E1 77 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 GALMQ96C23 342 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 ZNF48Q96MX3 618 aaPredicted RBP17.62■□□□□ 0.41
SNX1-206ENST00000559389 ZNF230Q9UIE0 474 aaPredicted RBP17.62■□□□□ 0.41
SNX1-206ENST00000559389 JPT1Q9UK76 154 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 TBL2Q9Y4P3 447 aaKnown RBP17.62■□□□□ 0.41
SNX1-206ENST00000559389 NAV3Q8IVL0 2385 aa17.62■□□□□ 0.41
SNX1-206ENST00000559389 IGHV3-43A0A0B4J1X8 118 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 MDFIC2A0A1B0GVS7 189 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 MEIOCA2RUB1 952 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 TRDCB7Z8K6 153 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 IGLV1-47P01700 117 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 IGHV3-43DP0DP04 118 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 PTHLHP12272 177 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 KIR2DS4P43632 304 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 GNMTQ14749 295 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 KIR2DS1Q14954 304 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 DEFB112Q30KQ8 113 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 Q3ZCU0 254 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 BEND2Q8NDZ0 799 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 OR4P4Q8NGL7 312 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 ZNF596Q8TC21 504 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 MAFIPQ8WZ33 124 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 AJUBAQ96IF1 538 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 C6orf62Q9GZU0 229 aaPredicted RBP17.61■□□□□ 0.41
SNX1-206ENST00000559389 GNG12Q9UBI6 72 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 EXTL2Q9UBQ6 330 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 ADAM30Q9UKF2 790 aa17.61■□□□□ 0.41
SNX1-206ENST00000559389 SCTP09683 121 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 GNG10P50151 68 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 HLA-DRB5Q30154 266 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms