RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 MARC2Q969Z3 335 aa13.43□□□□□ -0.26
USP8-208ENST00000559329 SFXN3Q9BWM7 321 aa13.43□□□□□ -0.26
USP8-208ENST00000559329 TNFSF12O43508 249 aa13.42□□□□□ -0.26
USP8-208ENST00000559329 HEXAP06865 529 aa13.42□□□□□ -0.26
USP8-208ENST00000559329 VDAC1P21796 283 aa13.42□□□□□ -0.26
USP8-208ENST00000559329 EIF5AL1Q6IS14 154 aaKnown RBP13.42□□□□□ -0.26
USP8-208ENST00000559329 UQCC3Q6UW78 93 aa13.42□□□□□ -0.26
USP8-208ENST00000559329 SMIM8Q96KF7 97 aa13.42□□□□□ -0.26
USP8-208ENST00000559329 OR14J1Q9UGF5 321 aa13.42□□□□□ -0.26
USP8-208ENST00000559329 BOD1L1Q8NFC6 3051 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 TMEM30CPA0ZSE6 113 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 ADAM20O43506 726 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 PTBP3O95758 552 aaKnown RBP13.41□□□□□ -0.26
USP8-208ENST00000559329 HOXA4Q00056 320 aaPredicted RBP13.41□□□□□ -0.26
USP8-208ENST00000559329 FAM209AQ5JX71 171 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 SLC35E4Q6ICL7 350 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 SAT2Q96F10 170 aaPredicted RBP13.41□□□□□ -0.26
USP8-208ENST00000559329 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 MKRN2OSH3BPM6 223 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 S100GP29377 79 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 ZNF83P51522 516 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 AKR1E2Q96JD6 320 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 SMIM3Q9BZL3 60 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 WFDC1Q9HC57 220 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 GLS2Q9UI32 602 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
USP8-208ENST00000559329 ANKRD11Q6UB99 2663 aaPredicted RBP13.4□□□□□ -0.26
USP8-208ENST00000559329 A6NLC8 198 aa13.4□□□□□ -0.26
USP8-208ENST00000559329 NUDT19A8MXV4 375 aa13.4□□□□□ -0.26
USP8-208ENST00000559329 IFNL4K9M1U5 179 aa13.4□□□□□ -0.26
USP8-208ENST00000559329 HOXD4P09016 255 aaPredicted RBP13.4□□□□□ -0.26
USP8-208ENST00000559329 CD200P41217 278 aa13.4□□□□□ -0.26
USP8-208ENST00000559329 NKX2-1P43699 371 aaPredicted RBP13.4□□□□□ -0.26
USP8-208ENST00000559329 SULT1A2P50226 295 aa13.4□□□□□ -0.26
USP8-208ENST00000559329 NKX6-1P78426 367 aaPredicted RBP13.4□□□□□ -0.26
USP8-208ENST00000559329 BPIFCQ8NFQ6 507 aa13.4□□□□□ -0.26
USP8-208ENST00000559329 COQ2Q96H96 371 aa13.4□□□□□ -0.26
USP8-208ENST00000559329 PARP12Q9H0J9 701 aaKnown RBP13.4□□□□□ -0.26
USP8-208ENST00000559329 ZSCAN5BA6NJL1 495 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 ZNF705EA8MWA4 302 aaPredicted RBP13.39□□□□□ -0.27
USP8-208ENST00000559329 OR3A1P47881 315 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 ID3Q02535 119 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 MZT1Q08AG7 82 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 GNMTQ14749 295 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 FAM180AQ6UWF9 173 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 CLEC9AQ6UXN8 241 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 PRR18Q8N4B5 295 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 SUN5Q8TC36 379 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 ARL11Q969Q4 196 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 TOLLIPQ9H0E2 274 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 MMP26Q9NRE1 261 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 UFSP2Q9NUQ7 469 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 B8ZZF3 427 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 C12orf77C9JDV5 145 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 M0R1B8 84 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 PITX3O75364 302 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 IGHV3-13P01766 116 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 TDGF1P3P51864 188 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 POLR2GP62487 172 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP8-208ENST00000559329 PAX5Q02548 391 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 SMIM21Q3B7S5 101 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 CXorf66Q5JRM2 361 aaPredicted RBP13.39□□□□□ -0.27
USP8-208ENST00000559329 LRP11Q86VZ4 500 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 UBALD1Q8TB05 177 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 ABHD17AQ96GS6 310 aa13.39□□□□□ -0.27
USP8-208ENST00000559329 PIGBOS1A0A0B4J2F0 54 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 A0A0G2JRQ6 117 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 HSPA12AO43301 675 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 IGKV1-39P01597 117 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 IGKV1D-39P04432 117 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 PSG2P11465 335 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 SLC25A6P12236 298 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 GLRXP35754 106 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 EWSR1Q01844 656 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP8-208ENST00000559329 OR2C3Q8N628 320 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 BOLLQ8N9W6 283 aaKnown RBP13.38□□□□□ -0.27
USP8-208ENST00000559329 OR51H1Q8NH63 302 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 GINS3Q9BRX5 216 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
USP8-208ENST00000559329 TMA7Q9Y2S6 64 aaKnown RBP13.38□□□□□ -0.27
USP8-208ENST00000559329 OOEPA6NGQ2 149 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 A8MXE2 369 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 TFF1P04155 84 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 MMP9P14780 707 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 CFHR2P36980 270 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 CEACAM6P40199 344 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 LPAR6P43657 344 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 NHLH2Q02577 135 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 AESQ08117 197 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 C1QTNF12Q5T7M4 302 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 IL34Q6ZMJ4 242 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 OR10Z1Q8NGY1 313 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 OR1L1Q8NH94 360 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 LYRM2Q9NU23 88 aaPredicted RBP13.37□□□□□ -0.27
USP8-208ENST00000559329 KCNIP1Q9NZI2 227 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 BSNQ9UPA5 3926 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 IGLV3-9A0A075B6K5 115 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 IGSF23A1L1A6 192 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms