RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 KRTAP21-3Q3LHN1 58 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 TIMM23BQ5SRD1 257 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 FAM162BQ5T6X4 162 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 SDHAF4Q5VUM1 108 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 NXNL2Q5VZ03 156 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 FAM151BQ6UXP7 276 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 DGAT2L6Q6ZPD8 337 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 FAM183BPQ6ZVS7 135 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 MARCH3Q86UD3 253 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 EIF4E3Q8N5X7 224 aaKnown RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 ZIC4Q8N9L1 334 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 DNAJB3Q8WWF6 145 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 APOBEC3DQ96AK3 386 aaPredicted RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 DDIT4LQ96D03 193 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 FAM210AQ96ND0 272 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 LINC01587Q99440 93 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 FAAP24Q9BTP7 215 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 ZNF426Q9BUY5 554 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 ULBP1Q9BZM6 244 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 GABARAPL1Q9H0R8 117 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 WDR54Q9H977 334 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 IMP3Q9NV31 184 aaKnown RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 ZNF443Q9Y2A4 671 aaPredicted RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 DOCK6Q96HP0 2047 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 MYO5BQ9ULV0 1848 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 BRD4O60885 1362 aaPredicted RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 KIAA0232Q92628 1395 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 ARAP3Q8WWN8 1544 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 RAD50Q92878 1312 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 ZNF638Q14966 1978 aaKnown RBP1.2□□□□□ -2.22
VPS13C-207ENST00000558919 A0A0B4J2C4 111 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 GGTLC3B5MD39 225 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 GOLGA8KD6RF30 607 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 FTCDNL1E5RQL4 147 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 F5H5K5 113 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 H3BMM0 161 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 GOLGA8MH3BSY2 632 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 J3QLI3 93 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 PHYHO14832 338 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 SLC31A1O15431 190 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 COCHO43405 550 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 PSIP1O75475 530 aaKnown RBP1.2□□□□□ -2.22
VPS13C-207ENST00000558919 ADAP1O75689 374 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 ATP6V1G2O95670 118 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 CDS2O95674 445 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 IGKV1-16P04430 117 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 CTSGP08311 255 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 SPNP16150 400 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 ZNF708P17019 499 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 PYCR1P32322 319 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 RCVRNP35243 200 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 PSMD7P51665 324 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 DLX6P56179 175 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 MED21Q13503 144 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 MMDQ15546 238 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 BCL2A1Q16548 175 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 EXOC3L4Q17RC7 722 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 ZNF181Q2M3W8 571 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 LGALSLQ3ZCW2 172 aaPredicted RBP1.2□□□□□ -2.22
VPS13C-207ENST00000558919 DNAL1Q4LDG9 190 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 ZCWPW2Q504Y3 356 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 PTRHD1Q6GMV3 140 aaKnown RBP1.2□□□□□ -2.22
VPS13C-207ENST00000558919 FAM45BPQ6NSW5 357 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 LYZL2Q7Z4W2 148 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 SLC13A5Q86YT5 568 aaPredicted RBP1.2□□□□□ -2.22
VPS13C-207ENST00000558919 GATD1Q8NB37 220 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 OR5L1Q8NGL2 311 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 DTD1Q8TEA8 209 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 MAL2Q969L2 176 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 UBE2WQ96B02 151 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 CLDN23Q96B33 292 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 CMTM5Q96DZ9 223 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 SMIM12Q96EX1 92 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 RBP7Q96R05 134 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 UGT2B28Q9BY64 529 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 SLC19A3Q9BZV2 496 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 OR2D2Q9H210 308 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 SPANXB1Q9NS25 103 aaPredicted RBP1.2□□□□□ -2.22
VPS13C-207ENST00000558919 DMAC2Q9NW81 257 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 CACNA1GO43497 2377 aa1.2□□□□□ -2.22
VPS13C-207ENST00000558919 LCTP09848 1927 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 A0A1B0GU33 70 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 A0A1W2PNM2 257 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 DAPL1A0PJW8 107 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 OR5H14A6NHG9 310 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 CCRL2O00421 344 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 GPR171O14626 319 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 ZW10O43264 779 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 FGF16O43320 207 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 ATP8B1O43520 1251 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 SYNGR1O43759 233 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 HPGDSO60760 199 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 SOX14O95416 240 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 DEXIO95424 95 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 PSMG1O95456 288 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 GPR75O95800 540 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 S100A6P06703 90 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 KRT7P08729 469 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 IFI30P13284 250 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 GABRA1P14867 456 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms