RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SLIRPQ9GZT3 109 aaKnown RBP14.22□□□□□ -0.13
TPM1-214ENST00000558544 RIMS4Q9H426 269 aaPredicted RBP14.22□□□□□ -0.13
TPM1-214ENST00000558544 LINC00574Q9H8X3 128 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 TAF9BQ9HBM6 251 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.22□□□□□ -0.13
TPM1-214ENST00000558544 DIABLOQ9NR28 239 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 KCNIP1Q9NZI2 227 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 TRBV6-6A0A0A6YYG2 114 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 A0A0A6YYH2 397 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 IGHV2-26A0A0B4J1V2 119 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 A6NJ64 397 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 NPFFO15130 113 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 HBZP02008 142 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 GSTP1P09211 210 aaKnown RBP14.22□□□□□ -0.13
TPM1-214ENST00000558544 BPIFB3P59826 476 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 ARL6IP1Q15041 203 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 ZNF260Q3ZCT1 412 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 UTF1Q5T230 341 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 C9orf139Q6ZV77 190 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 MOB1BQ7L9L4 216 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 OR1L1Q8NH94 360 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 CLEC7AQ9BXN2 247 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 ZNF286AQ9HBT8 521 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 IGHV3-43A0A0B4J1X8 118 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 MEIOCA2RUB1 952 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 SDCBPO00560 298 aaPredicted RBP14.21□□□□□ -0.14
TPM1-214ENST00000558544 SPINT2O43291 252 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 APOA1P02647 267 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 ARG1P05089 322 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 IGHV3-43DP0DP04 118 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 ELK1P19419 428 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 FPR2P25090 351 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 SAA4P35542 130 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 HMGN3Q15651 99 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 HACD4Q5VWC8 232 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 OR10A7Q8NGE5 316 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 NUDCD2Q8WVJ2 157 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 CMTM3Q96MX0 182 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 OCEL1Q9H607 264 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 Q9N2K0 584 aa14.21□□□□□ -0.14
TPM1-214ENST00000558544 A0A0U1RQK1 487 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 MDFIC2A0A1B0GVS7 189 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 ODF3BA8MYP8 253 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 F2RL2O00254 374 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 XRCC3O43542 346 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 IGHV3-7P01780 117 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 FCGR3AP08637 254 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 TALDO1P37837 337 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 GNG2P59768 71 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 HLA-DRB3P79483 266 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 TMEM69Q5SWH9 247 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 ZNF626Q68DY1 528 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 FAM53AQ6NSI3 398 aaPredicted RBP14.2□□□□□ -0.14
TPM1-214ENST00000558544 ZNF554Q86TJ5 538 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 ABHD12Q8N2K0 398 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 OR11H6Q8NGC7 330 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 MAFIPQ8WZ33 124 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 LEAP2Q969E1 77 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 ZNF48Q96MX3 618 aaPredicted RBP14.2□□□□□ -0.14
TPM1-214ENST00000558544 NXF2Q9GZY0 626 aaKnown RBP14.2□□□□□ -0.14
TPM1-214ENST00000558544 RAB9BQ9NP90 201 aa14.2□□□□□ -0.14
TPM1-214ENST00000558544 ZNF230Q9UIE0 474 aaPredicted RBP14.2□□□□□ -0.14
TPM1-214ENST00000558544 A0A087X0M5 115 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 A0A1B0GX30 115 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 FAM25AB3EWG3 89 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 FAM25CB3EWG5 89 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 FAM25GB3EWG6 89 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 RGS5O15539 181 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 PTHLHP12272 177 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 CD34P28906 385 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 GNG10P50151 68 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 LOXL3P58215 753 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 TAS2R20P59543 309 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 MADCAM1Q13477 382 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 PNLIPRP3Q17RR3 467 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 DEFB112Q30KQ8 113 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 SIGLECL1Q8N7X8 197 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 AUNIPQ9H7T9 357 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 GFOD1Q9NXC2 390 aa14.19□□□□□ -0.14
TPM1-214ENST00000558544 CTDSP2O14595 271 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 MNDAP41218 407 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 LGALS4P56470 323 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 MIDNQ504T8 468 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 LHFPL4Q7Z7J7 247 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 LAX1Q8IWV1 398 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 OR10V1Q8NGI7 309 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 OR52M1Q8NGK5 317 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 MCFD2Q8NI22 146 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 C17orf50Q8WW18 174 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 IL1F10Q8WWZ1 152 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 C6orf62Q9GZU0 229 aaPredicted RBP14.18□□□□□ -0.14
TPM1-214ENST00000558544 MIXL1Q9H2W2 232 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 ZNRD1Q9P1U0 126 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 GNG12Q9UBI6 72 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 MGAT4AQ9UM21 535 aa14.18□□□□□ -0.14
TPM1-214ENST00000558544 POM121CA8CG34 1229 aa14.17□□□□□ -0.14
TPM1-214ENST00000558544 TOR1AO14656 332 aa14.17□□□□□ -0.14
TPM1-214ENST00000558544 SSX5O60225 188 aa14.17□□□□□ -0.14
TPM1-214ENST00000558544 PITPNAQ00169 270 aa14.17□□□□□ -0.14
TPM1-214ENST00000558544 GNMTQ14749 295 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms