RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 A0A1W2PRD5 423 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 A0A1W2PRF3 423 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 A0A1W2PRM7 423 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 NPIPB11E5RHQ5 1161 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 RNASEK-C17orf49H0YIS7 233 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 HBZP02008 142 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 MELTFP08582 738 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 OR52W1Q6IF63 320 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 C5orf24Q7Z6I8 188 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 SNX29P2Q8IUI4 249 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 PNKDQ8N490 385 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 OR13D1Q8NGV5 346 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 MAFIPQ8WZ33 124 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 DIRAS2Q96HU8 199 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 KIRREL1Q96J84 757 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 ST6GALNAC5Q9BVH7 336 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 TMEM133Q9H2Q1 129 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 LINC00574Q9H8X3 128 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 MGAT4AQ9UM21 535 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 A3GALT2U3KPV4 340 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 FAM172BPA6NC97 362 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 POM121CA8CG34 1229 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 SSX5O60225 188 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 FPR2P25090 351 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 S100A5P33763 92 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 GUCA2AQ02747 115 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 HMGN3Q15651 99 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 CHRFAM7AQ494W8 412 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 ZNF554Q86TJ5 538 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 NUP50Q9UKX7 468 aa17.38■□□□□ 0.37
CASC4-204ENST00000557945 IGHV1-69DA0A0B4J2H0 117 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 TRDCB7Z8K6 153 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 SDCBPO00560 298 aaPredicted RBP17.37■□□□□ 0.37
CASC4-204ENST00000557945 FSHBP01225 129 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 IGHV1-69P01742 117 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 HLA-DQB1P01920 261 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 DTYMKP23919 212 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 PRSS3P35030 304 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 HLA-DRB3P79483 266 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 CNPY1Q3B7I2 92 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 HCP5Q6MZN7 132 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 BRD3OSQ6XYD6 125 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 OR10A7Q8NGE5 316 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 IL1F10Q8WWZ1 152 aa17.37■□□□□ 0.37
CASC4-204ENST00000557945 GCDHQ92947 438 aaPredicted RBP17.37■□□□□ 0.37
CASC4-204ENST00000557945 IGHV3-43A0A0B4J1X8 118 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 F2RL2O00254 374 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 IGHV3-43DP0DP04 118 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 SRD5A1P18405 259 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 TNFSF8P32971 234 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 UBE2E1P51965 193 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 RUSC1-AS1Q66K80 236 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 ABHD12Q8N2K0 398 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 LEAP2Q969E1 77 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 GALMQ96C23 342 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 GNG12Q9UBI6 72 aa17.36■□□□□ 0.37
CASC4-204ENST00000557945 IGHV2-26A0A0B4J1V2 119 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 MEIS3P1A6NDR6 274 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 IGHV3-7P01780 117 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 SCTP09683 121 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 KIR2DS4P43632 304 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 KIR2DS1Q14954 304 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 CLEC7AQ9BXN2 247 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 MS4A7Q9GZW8 240 aaPredicted RBP17.35■□□□□ 0.37
CASC4-204ENST00000557945 ZNF286AQ9HBT8 521 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 OR2S2Q9NQN1 319 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 SVEP1Q4LDE5 3571 aa17.35■□□□□ 0.37
CASC4-204ENST00000557945 ANK3Q12955 4377 aaKnown RBP17.34■□□□□ 0.37
CASC4-204ENST00000557945 NPFFO15130 113 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 FABP7O15540 132 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 FCER2P06734 321 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 CBX5P45973 191 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 TMEM30BQ3MIR4 351 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 UTF1Q5T230 341 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 OR52L2PQ8NGH6 319 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 OR10V1Q8NGI7 309 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 OR52M1Q8NGK5 317 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 C22orf15Q8WYQ4 148 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 IFT46Q9NQC8 304 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 GFOD1Q9NXC2 390 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 ZNF69Q9UC07 566 aa17.34■□□□□ 0.37
CASC4-204ENST00000557945 FN1P02751 2386 aaKnown RBP17.33■□□□□ 0.37
CASC4-204ENST00000557945 MEIOCA2RUB1 952 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 TOR1AO14656 332 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 CRLF1O75462 422 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 ARG1P05089 322 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 GSTT2P0CG29 244 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 GSTT2BP0CG30 244 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 EPHA1P21709 976 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 GNG10P50151 68 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 LOXL3P58215 753 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 HTD2P86397 168 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 IL18Q14116 193 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 SRSF7Q16629 238 aaKnown RBP eCLIP17.33■□□□□ 0.36
CASC4-204ENST00000557945 RNASE12Q5GAN4 147 aaKnown RBP17.33■□□□□ 0.36
CASC4-204ENST00000557945 FAM53AQ6NSI3 398 aaPredicted RBP17.33■□□□□ 0.36
CASC4-204ENST00000557945 GVQW1Q8N7I0 195 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 C15orf40Q8WUR7 153 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 ABHD1Q96SE0 405 aa17.33■□□□□ 0.36
CASC4-204ENST00000557945 OCSTAMPQ9BR26 566 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms