RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 NFYBP25208 207 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 HCP5Q6MZN7 132 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 ST6GALNAC5Q9BVH7 336 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
NEDD1-213ENST00000557644 ADAM30Q9UKF2 790 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 hCG_1809904A0A1W2PP81 198 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 A0A1W2PPE2 198 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 A0A1W2PR64 198 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 A0A1W2PRD5 423 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 A0A1W2PRF3 423 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 A0A1W2PRM7 423 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 A0A1W2PRV1 198 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 ORC5O43913 435 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 SCTP09683 121 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 COX7A1P24310 79 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 PNKDQ8N490 385 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 LEAP2Q969E1 77 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 SUCNR1Q9BXA5 334 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 IGHV3-43A0A0B4J1X8 118 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 CENPVL3A0A0U1RRI6 287 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 RBP4P02753 201 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 IGHV3-43DP0DP04 118 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 PITPNAQ00169 270 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 HMGN3Q15651 99 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 IDI2-AS1Q9NZ38 188 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 SESN1Q9Y6P5 492 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 NIPBLQ6KC79 2804 aaeCLIP12.48□□□□□ -0.41
NEDD1-213ENST00000557644 S100A5P33763 92 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
NEDD1-213ENST00000557644 BRD3OSQ6XYD6 125 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 MOB1BQ7L9L4 216 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 IL1F10Q8WWZ1 152 aa12.48□□□□□ -0.41
NEDD1-213ENST00000557644 SPINT2O43291 252 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 DTYMKP23919 212 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 FPR2P25090 351 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 PRSS3P35030 304 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 LOXL3P58215 753 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 HLA-DRB3P79483 266 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 TRAT1Q6PIZ9 186 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 OR6Q1Q8NGQ2 317 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
NEDD1-213ENST00000557644 NAV3Q8IVL0 2385 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 FSHBP01225 129 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 GSTT2P0CG29 244 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 GSTT2BP0CG30 244 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 IL18Q14116 193 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 GNMTQ14749 295 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 OR52L2PQ8NGH6 319 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 OR10V1Q8NGI7 309 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 NANPQ8TBE9 248 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 ZNRD1Q9P1U0 126 aa12.47□□□□□ -0.41
NEDD1-213ENST00000557644 IGKV1-6A0A0C4DH72 117 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 TRDCB7Z8K6 153 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 F2RL2O00254 374 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 SDCBPO00560 298 aaPredicted RBP12.46□□□□□ -0.41
NEDD1-213ENST00000557644 HERPUD1Q15011 391 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 GPR157Q5UAW9 335 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 ZNF554Q86TJ5 538 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 C22orf15Q8WYQ4 148 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 GALMQ96C23 342 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 SOSTQ9BQB4 213 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 OCSTAMPQ9BR26 566 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 ZNF286AQ9HBT8 521 aa12.46□□□□□ -0.41
NEDD1-213ENST00000557644 IGHV2-26A0A0B4J1V2 119 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 FABP12A6NFH5 140 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 IGSF11Q5DX21 431 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 NCR3LG1Q68D85 454 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 CCDC190Q86UF4 302 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 GPX8Q8TED1 209 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 HEXA-AS1Q9H8Q6 139 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 OR2S2Q9NQN1 319 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 IGHV1-69DA0A0B4J2H0 117 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 FABP7O15540 132 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 IGHV1-69P01742 117 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 SRP14P37108 136 aaKnown RBP12.45□□□□□ -0.42
NEDD1-213ENST00000557644 OR52W1Q6IF63 320 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 FAM131AQ6UXB0 335 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 ABHD12Q8N2K0 398 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 OR52I2Q8NH67 350 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 SNAPC3Q92966 411 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 BEX2Q9BXY8 128 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 GFOD1Q9NXC2 390 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 OR1A1Q9P1Q5 309 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 SLC23A1Q9UHI7 598 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 MGAT4AQ9UM21 535 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 V9GYH0 126 aa12.45□□□□□ -0.42
NEDD1-213ENST00000557644 A0A1W2PPE3 182 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 POM121CA8CG34 1229 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 LPLP06858 475 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 HNF1AP20823 631 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 PPP1CCP36873 323 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms