RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 SEC61A1P61619 476 aaKnown RBP8.76□□□□□ -1.01
PRKCH-227ENST00000557599 MEF2CQ06413 473 aaPredicted RBP8.76□□□□□ -1.01
PRKCH-227ENST00000557599 LOXL1Q08397 574 aaPredicted RBP8.76□□□□□ -1.01
PRKCH-227ENST00000557599 RBMS2Q15434 407 aaKnown RBP8.76□□□□□ -1.01
PRKCH-227ENST00000557599 TMEM30BQ3MIR4 351 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 AVPI1Q5T686 147 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 C11orf88Q6PI97 169 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 RTN4RL2Q86UN3 420 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 CENPSQ8N2Z9 138 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 OR6F1Q8NGZ6 308 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 CHPT1Q8WUD6 406 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 FAM168AQ92567 244 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 GALMQ96C23 342 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
PRKCH-227ENST00000557599 GAL3ST2Q9H3Q3 398 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 METRNQ9UJH8 293 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 MAB21L2Q9Y586 359 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 NUBP2Q9Y5Y2 271 aa8.76□□□□□ -1.01
PRKCH-227ENST00000557599 KIAA2026Q5HYC2 2103 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 TRBV23-1A0A0A0MS06 115 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 FAM172BPA6NC97 362 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 CEACAM18A8MTB9 384 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 BET1O15155 118 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 LY6HO94772 140 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 RGS11O94810 467 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 PGAM2P15259 253 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 S100GP29377 79 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 GLIPR1P48060 266 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 RPL31P62899 125 aaKnown RBP8.75□□□□□ -1.01
PRKCH-227ENST00000557599 HOXA4Q00056 320 aaPredicted RBP8.75□□□□□ -1.01
PRKCH-227ENST00000557599 ESCO2Q56NI9 601 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 ZNF880Q6PDB4 577 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 IDO2Q6ZQW0 420 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 NRARPQ7Z6K4 114 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 GAPTQ8N292 157 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 OR51S1Q8NGJ8 323 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 OR56B4Q8NH76 319 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 OR10J5Q8NHC4 309 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 MRGPRDQ8TDS7 321 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 IL1F10Q8WWZ1 152 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 SNAPC3Q92966 411 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 COQ2Q96H96 371 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 TINAGL1Q9GZM7 467 aaPredicted RBP8.75□□□□□ -1.01
PRKCH-227ENST00000557599 SHARPINQ9H0F6 387 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 TAF9BQ9HBM6 251 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 SLC2A8Q9NY64 477 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 CLN8Q9UBY8 286 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 OPN4Q9UHM6 478 aa8.75□□□□□ -1.01
PRKCH-227ENST00000557599 DOCK11Q5JSL3 2073 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 ABCA1O95477 2261 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 hCG_1809904A0A1W2PP81 198 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 A0A1W2PPE2 198 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 A0A1W2PR64 198 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 A0A1W2PRV1 198 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 VWC2LB2RUY7 222 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 DVL1O14640 695 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 DHFRP00374 187 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 TFF1P04155 84 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 GSTT2P0CG29 244 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 RCC1P18754 421 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 SLC6A1P30531 599 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 GNB2P62879 340 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 OXA1LQ15070 435 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 HMGN3Q15651 99 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 TMEM249Q2WGJ8 235 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 C11orf91Q3C1V1 193 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 CD276Q5ZPR3 534 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 LPCAT3Q6P1A2 487 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 CCBE1Q6UXH8 406 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 BTN2A1Q7KYR7 527 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 OVCH2Q7RTZ1 564 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 FAM185AQ8N0U4 392 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 PRR18Q8N4B5 295 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 ZNF525Q8N782 197 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 C10orf105Q8TEF2 133 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 ARL11Q969Q4 196 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 DACT3Q96B18 629 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 CREB3L1Q96BA8 519 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 KIRREL1Q96J84 757 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 PATZ1Q9HBE1 687 aaKnown RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 MBNL3Q9NUK0 354 aaKnown RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 TAS2R3Q9NYW6 316 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 ZNF69Q9UC07 566 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 SLC23A1Q9UHI7 598 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 C14orf166Q9Y224 244 aaKnown RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 UBE2J1Q9Y385 318 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 RBM7Q9Y580 266 aaKnown RBP8.74□□□□□ -1.01
PRKCH-227ENST00000557599 LINC00312Q9Y6C7 94 aa8.74□□□□□ -1.01
PRKCH-227ENST00000557599 ZNF729A6NN14 1252 aaPredicted RBP8.73□□□□□ -1.01
PRKCH-227ENST00000557599 SDCBPO00560 298 aaPredicted RBP8.73□□□□□ -1.01
PRKCH-227ENST00000557599 NDUFB6O95139 128 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 HBZP02008 142 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 TCRBP04435 133 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 RLN1P04808 185 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 H2AFB2P0C5Z0 115 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 SELLP14151 372 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 SLC25A16P16260 332 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 ZBTB25P24278 435 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 TAS2R31P59538 309 aa8.73□□□□□ -1.01
PRKCH-227ENST00000557599 SURF2Q15527 256 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms