RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 BOD1L1Q8NFC6 3051 aa15.06■□□□□ 0
XRCC3-218ENST00000557439 H0YL77 283 aa15.05■□□□□ 0
XRCC3-218ENST00000557439 APLNRP35414 380 aa15.05■□□□□ 0
XRCC3-218ENST00000557439 CEBPDP49716 269 aaPredicted RBP15.05■□□□□ 0
XRCC3-218ENST00000557439 HMGN3Q15651 99 aa15.05■□□□□ 0
XRCC3-218ENST00000557439 EIF2S3LQ2VIR3 472 aaKnown RBP15.05■□□□□ 0
XRCC3-218ENST00000557439 SOHLH1Q5JUK2 328 aa15.05■□□□□ 0
XRCC3-218ENST00000557439 RNFT1Q5M7Z0 435 aa15.05■□□□□ 0
XRCC3-218ENST00000557439 PBDC1Q9BVG4 233 aa15.05■□□□□ 0
XRCC3-218ENST00000557439 BCL2L14Q9BZR8 327 aa15.05■□□□□ 0
XRCC3-218ENST00000557439 RBFOX3A6NFN3 312 aa15.05■□□□□ -0
XRCC3-218ENST00000557439 TXNL1O43396 289 aa15.05■□□□□ -0
XRCC3-218ENST00000557439 IGKV1-39P01597 117 aa15.05■□□□□ -0
XRCC3-218ENST00000557439 IGKV1D-39P04432 117 aa15.05■□□□□ -0
XRCC3-218ENST00000557439 CLN3Q13286 438 aa15.05■□□□□ -0
XRCC3-218ENST00000557439 RNASE11Q8TAA1 199 aaKnown RBP15.05■□□□□ -0
XRCC3-218ENST00000557439 OR2W1Q9Y3N9 320 aa15.05■□□□□ -0
XRCC3-218ENST00000557439 H0Y980 276 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 TFF1P04155 84 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 FOLR2P14207 255 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 ZNF14P17017 642 aaPredicted RBP15.04■□□□□ -0
XRCC3-218ENST00000557439 TMPRSS7Q7RTY8 843 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 RSG1Q9BU20 258 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 SLC25A31Q9H0C2 315 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 CHD3Q12873 2000 aaKnown RBP15.04■□□□□ -0
XRCC3-218ENST00000557439 LINC01387J3KSC0 135 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 CNOT4O95628 575 aaKnown RBP15.04■□□□□ -0
XRCC3-218ENST00000557439 IGLV2-14P01704 120 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 MT-ND4LP03901 98 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 RAB5AP20339 215 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 ARR3P36575 388 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 RPS23P62266 143 aaKnown RBP15.04■□□□□ -0
XRCC3-218ENST00000557439 GNG3P63215 75 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 HLA-DRB3P79483 266 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 PMP22Q01453 160 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 FAM180AQ6UWF9 173 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 DHRS13Q6UX07 377 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 THNSL2Q86YJ6 484 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 OR5D13Q8NGL4 314 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 OR1K1Q8NGR3 316 aa15.04■□□□□ -0
XRCC3-218ENST00000557439 DEGS1O15121 323 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 WISP2O76076 250 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 S100A6P06703 90 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 SERPINE2P07093 398 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 NANPQ8TBE9 248 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 VSIRQ9H7M9 311 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 MMP24Q9Y5R2 645 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 COX5BP10606 129 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 FABP9Q0Z7S8 132 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 ZNF343Q6P1L6 599 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 ZNF573Q86YE8 665 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 H1FOOQ8IZA3 346 aaPredicted RBP15.03■□□□□ -0
XRCC3-218ENST00000557439 GCNT2Q8N0V5 402 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 CYB561D1Q8N8Q1 229 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 OR51I2Q9H344 312 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 CACNG5Q9UF02 275 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 KCNS2Q9ULS6 477 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 RBM7Q9Y580 266 aaKnown RBP15.03■□□□□ -0
XRCC3-218ENST00000557439 DOCK11Q5JSL3 2073 aa15.03■□□□□ -0
XRCC3-218ENST00000557439 BDP1A6H8Y1 2624 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 C5orf52A6NGY3 159 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 SP1P08047 785 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 NQO2P16083 231 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 ARL16Q0P5N6 197 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 DDA1Q9BW61 102 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 OR2J1Q9GZK6 312 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 SPRR3Q9UBC9 169 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 URGCP-MRPS24S4R325 110 aa15.02■□□□□ -0
XRCC3-218ENST00000557439 CLEC18AA5D8T8 446 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 CDIPTO14735 213 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 HSPA12AO43301 675 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 WDR1O75083 606 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 METTL15P1P0C7V9 234 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 AGAP20933 346 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 TLE1Q04724 770 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 Q6P435 159 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 CXorf67Q86X51 503 aaPredicted RBP15.02□□□□□ -0.01
XRCC3-218ENST00000557439 CLEC18CQ8NCF0 446 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 OR1J1Q8NGS3 322 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 ZPBPQ9BS86 351 aa15.02□□□□□ -0.01
XRCC3-218ENST00000557439 KIAA1324LA8MWY0 1029 aaPredicted RBP15.01□□□□□ -0.01
XRCC3-218ENST00000557439 H3BQ15 152 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 IDH3GP51553 393 aaPredicted RBP15.01□□□□□ -0.01
XRCC3-218ENST00000557439 ICAM4Q14773 271 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 TESK1Q15569 626 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 AKR1C8PQ5T2L2 129 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 DBX2Q6ZNG2 339 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 RAB39BQ96DA2 213 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 ABI3Q9P2A4 366 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 OR2C1O95371 312 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 OR2H2O95918 312 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 IGKV1-5P01602 117 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 SRP19P09132 144 aaKnown RBP15.01□□□□□ -0.01
XRCC3-218ENST00000557439 CTXN2P0C2S0 81 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 PAX6P26367 422 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 SRSF7Q16629 238 aaKnown RBP eCLIP15.01□□□□□ -0.01
XRCC3-218ENST00000557439 OR2B11Q5JQS5 317 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 SLC25A24Q6NUK1 477 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 OR10V1Q8NGI7 309 aa15.01□□□□□ -0.01
XRCC3-218ENST00000557439 OR14J1Q9UGF5 321 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms