RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 LOXL3P58215 753 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 PROK1P58294 105 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 PDZK1IP1Q13113 114 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 ATPAF1Q5TC12 328 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-230ENST00000557427 OR52W1Q6IF63 320 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 FIP1L1Q6UN15 594 aaKnown RBP10.31□□□□□ -0.76
SHMT2-230ENST00000557427 NLRC3Q7RTR2 1065 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 REC114Q7Z4M0 266 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 RTN4RL2Q86UN3 420 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 SAXO1Q8IYX7 474 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 C1orf87Q8N0U7 546 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 MUC20Q8N307 709 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-230ENST00000557427 FTMTQ8N4E7 242 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 ARRDC1Q8N5I2 433 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 ASCC1Q8N9N2 400 aaKnown RBP10.31□□□□□ -0.76
SHMT2-230ENST00000557427 OR4K15Q8NH41 348 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 ZNF431Q8TF32 576 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-230ENST00000557427 ASB13Q8WXK3 278 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 SNAPC3Q92966 411 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 OR2A7Q96R45 310 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 TMEM246Q9BRR3 403 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 ADAT1Q9BUB4 502 aaKnown RBP10.31□□□□□ -0.76
SHMT2-230ENST00000557427 GON7Q9BXV9 100 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 TNFRSF19Q9NS68 423 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 C1orf123Q9NWV4 160 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 MGAT4CQ9UBM8 478 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 RNF114Q9Y508 228 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 INSIG2Q9Y5U4 225 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 PLXNB1O43157 2135 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 RYR2Q92736 4967 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 PQLC2LA1A4F0 135 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 ANKRD30BLA7E2S9 258 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 ZNF850A8MQ14 1090 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 SMLR1H3BR10 107 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 H3BUI4 141 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 ANGPTL7O43827 346 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 PLATP00750 562 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 IFNA6P05013 189 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 OR4E1P0C645 316 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 RPS2P15880 293 aaKnown RBP10.3□□□□□ -0.76
SHMT2-230ENST00000557427 GATA4P43694 442 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 TAS2R46P59540 309 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 RAP2BP61225 183 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 PRDX4Q13162 271 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 MICBQ29980 383 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 ESCO2Q56NI9 601 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 LAMTOR1Q6IAA8 161 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 LYPD2Q6UXB3 125 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 ZNF826PQ6ZT77 177 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 ZDHHC23Q8IYP9 409 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 OSR2Q8N2R0 312 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 C9orf62Q8N4C0 152 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 Q8NFD4 153 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 ERGIC1Q969X5 290 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 CHIAQ9BZP6 476 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 PRDM13Q9H4Q3 707 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 FN3KRPQ9HA64 309 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 PLSCR3Q9NRY6 295 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 RNF7Q9UBF6 113 aa10.3□□□□□ -0.76
SHMT2-230ENST00000557427 POLR3KQ9Y2Y1 108 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-230ENST00000557427 NOP16Q9Y3C1 178 aaKnown RBP10.3□□□□□ -0.76
SHMT2-230ENST00000557427 IGKV1-12A0A0C4DH73 117 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A10PA6NDY2 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A18PA6NE21 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A16PA6NEW6 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A20PA6NIJ5 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A8PA6NJQ4 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A7PA6NKC0 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 A6NLC8 198 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A22PA8MWA6 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A12PA8MX19 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A5PA8MXJ8 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A23PA8MXZ1 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 SRRM5B3KS81 715 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 SNAPC5O75971 98 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 IGKV1D-12P01611 117 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 PMP2P02689 132 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A15PP0C7V4 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A13PP0C7W8 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A14PP0C7W9 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 FAM90A24PP0C7X0 464 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 AMY2BP19961 511 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 CHATP28329 748 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 NDUFA5Q16718 116 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 DEFB112Q30KQ8 113 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 CEACAM21Q3KPI0 293 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 SCGB2B2Q4G0G5 96 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 C4orf46Q504U0 113 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 SLC25A42Q86VD7 318 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 SPERTQ8NA61 448 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 OR2AK2Q8NG84 335 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 OR5A2Q8NGI9 324 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 OR5H2Q8NGV7 314 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 Q8TCH9 128 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
SHMT2-230ENST00000557427 MRGPRFQ96AM1 343 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 PAPOLGQ9BWT3 736 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms