RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 ST6GALNAC5Q9BVH7 336 aa10.47□□□□□ -0.73
SHMT2-227ENST00000557269 SUCNR1Q9BXA5 334 aa10.47□□□□□ -0.73
SHMT2-227ENST00000557269 UNKLQ9H9P5 680 aaKnown RBP10.47□□□□□ -0.73
SHMT2-227ENST00000557269 TMEM160Q9NX00 188 aa10.47□□□□□ -0.73
SHMT2-227ENST00000557269 IDI2-AS1Q9NZ38 188 aa10.47□□□□□ -0.73
SHMT2-227ENST00000557269 SVEP1Q4LDE5 3571 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 IGHV3-43A0A0B4J1X8 118 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 TRAV40A0A0B4J280 105 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 IGKV1-6A0A0C4DH72 117 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 A0A1W2PRD5 423 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 A0A1W2PRF3 423 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 A0A1W2PRM7 423 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 IGHV3-43DP0DP04 118 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 COX7A1P24310 79 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 NFYBP25208 207 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 TALDO1P37837 337 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 MNDAP41218 407 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 LOXL3P58215 753 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 MRPS15P82914 257 aaKnown RBP10.46□□□□□ -0.73
SHMT2-227ENST00000557269 GNMTQ14749 295 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 RUSC1-AS1Q66K80 236 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 GVQW1Q8N7I0 195 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 OR52L2PQ8NGH6 319 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 SOSTQ9BQB4 213 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 ZNF286AQ9HBT8 521 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 KCNIP1Q9NZI2 227 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 ZNRD1Q9P1U0 126 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 SESN1Q9Y6P5 492 aa10.46□□□□□ -0.73
SHMT2-227ENST00000557269 hCG_1809904A0A1W2PP81 198 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 A0A1W2PPE2 198 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 A0A1W2PR64 198 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 A0A1W2PRV1 198 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 TRDCB7Z8K6 153 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 F2RL2O00254 374 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 SDCBPO00560 298 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-227ENST00000557269 GSTT2P0CG29 244 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 DTYMKP23919 212 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 FPR2P25090 351 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 PRSS3P35030 304 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 HLA-DRB3P79483 266 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 PITPNAQ00169 270 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 HERPUD1Q15011 391 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 RNASE12Q5GAN4 147 aaKnown RBP10.45□□□□□ -0.74
SHMT2-227ENST00000557269 BRD3OSQ6XYD6 125 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 CCDC190Q86UF4 302 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 BCL6BQ8N143 479 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-227ENST00000557269 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 NANPQ8TBE9 248 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 TMEM133Q9H2Q1 129 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 ADAM30Q9UKF2 790 aa10.45□□□□□ -0.74
SHMT2-227ENST00000557269 A0A087X0M5 115 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 IGHV2-26A0A0B4J1V2 119 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 IGHV1-69DA0A0B4J2H0 117 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 A0A1B0GX30 115 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 POM121CA8CG34 1229 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 SPINT2O43291 252 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 IGHV1-69P01742 117 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 SRSF7Q16629 238 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHMT2-227ENST00000557269 IGSF11Q5DX21 431 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 LDLRAD2Q5SZI1 272 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 TRAT1Q6PIZ9 186 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 MOB1BQ7L9L4 216 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 ZNF554Q86TJ5 538 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 ABHD12Q8N2K0 398 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 OR10A7Q8NGE5 316 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 OR10V1Q8NGI7 309 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 GPX8Q8TED1 209 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 C17orf50Q8WW18 174 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 IL1F10Q8WWZ1 152 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 C22orf15Q8WYQ4 148 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 AJUBAQ96IF1 538 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 HEXA-AS1Q9H8Q6 139 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 GFOD1Q9NXC2 390 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 OR1A1Q9P1Q5 309 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 ZNF69Q9UC07 566 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 V9GYH0 126 aa10.44□□□□□ -0.74
SHMT2-227ENST00000557269 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
SHMT2-227ENST00000557269 A0A1W2PPE3 182 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 FABP12A6NFH5 140 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 SLC31A2O15432 143 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 FABP7O15540 132 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 CD34P28906 385 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 S100A5P33763 92 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 PPP1CCP36873 323 aaKnown RBP10.43□□□□□ -0.74
SHMT2-227ENST00000557269 UBE2E1P51965 193 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 ZNF134P52741 427 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 DGCR2P98153 550 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 IL18Q14116 193 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 NCR3LG1Q68D85 454 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 OR52W1Q6IF63 320 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 Q6ZS49 121 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 HOGA1Q86XE5 327 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 OR11H6Q8NGC7 330 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 OR13D1Q8NGV5 346 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 OR52I2Q8NH67 350 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 SNAPC3Q92966 411 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 GALMQ96C23 342 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 BEX2Q9BXY8 128 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms