RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 CEBPGP53567 150 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 MTCP1P56278 107 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RAB38P57729 211 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 CARD18P57730 90 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 SUPT4H1P63272 117 aaKnown RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 PAFAH1B2P68402 229 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 CSNK1G2P78368 415 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 FOXF1Q12946 379 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 IL24Q13007 206 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 FZD2Q14332 565 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 GNMTQ14749 295 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 ARL6IP1Q15041 203 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 SHHQ15465 462 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 TMEM183BQ1AE95 376 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 HYAL4Q2M3T9 481 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 ITPRIPL2Q3MIP1 535 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RTL6Q6ICC9 239 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 ODF3L1Q8IXM7 274 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 SLC22A24Q8N4F4 322 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 C2orf73Q8N5S3 287 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 TMEM156Q8N614 296 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 CYB561D1Q8N8Q1 229 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 CDRT4Q8N9R6 151 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 OR56B2PQ8NGI1 322 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 OR51A4Q8NGJ6 313 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 OR5AR1Q8NGP9 310 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 OTOSQ8NHW6 89 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RNASE8Q8TDE3 154 aaKnown RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 GPR119Q8TDV5 335 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 LIPHQ8WWY8 451 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 WBP2Q969T9 261 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 MOB3AQ96BX8 217 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RASD2Q96D21 266 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 IL17FQ96PD4 163 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 TP53RKQ96S44 253 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 TBX15Q96SF7 602 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 NKX3-1Q99801 234 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RTBDNQ9BSG5 229 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 ALKBH7Q9BT30 221 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RAB11FIP5Q9BXF6 653 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 MAP1LC3BQ9GZQ8 125 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 WWTR1Q9GZV5 400 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 CSTL1Q9H114 145 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 WFDC1Q9HC57 220 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 Q9N2K0 584 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 GPR84Q9NQS5 396 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.2□□□□□ -1.92e-6■■■■■ 35.4
FOXN3-213ENST00000556916 SERINC1Q9NRX5 453 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 FLRT3Q9NZU0 649 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 NAT8Q9UHE5 227 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 AK3Q9UIJ7 227 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 ABT1Q9ULW3 272 aaKnown RBP3.2□□□□□ -1.9
FOXN3-213ENST00000556916 PLAGL1Q9UM63 463 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 HS3ST2Q9Y278 367 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 LIPGQ9Y5X9 500 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 COLEC10Q9Y6Z7 277 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 PCNX3Q9H6A9 2034 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 FREM3P0C091 2139 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 KIAA2026Q5HYC2 2103 aa3.2□□□□□ -1.9
FOXN3-213ENST00000556916 RALGAPA1Q6GYQ0 2036 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 TRAV30A0A087WSZ9 112 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 A0A087WV48 116 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 NSG1A0A0A6YYJ2 146 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 TRAV1-1A0A0B4J248 108 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 A0A1B0GV50 99 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 A0A1W2PPV9 198 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 A6NCN8 305 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 ZNF732B4DXR9 585 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 GPR89AB7ZAQ6 455 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 H3BSH0 61 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 ST8SIA3O43173 380 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 WDR1O75083 606 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 PITX3O75364 302 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 MMP23AO75900 390 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 PNPP00491 289 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 TIMP1P01033 207 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 PCCBP05166 539 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 ASGR1P07306 291 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 CTSDP07339 412 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-213ENST00000556916 PFN1P07737 140 aaKnown RBP3.19□□□□□ -1.9
FOXN3-213ENST00000556916 GPR89BP0CG08 455 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 CEACAM1P13688 526 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 MMP9P14780 707 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 FOSL2P15408 326 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 GNB3P16520 340 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 SELEP16581 610 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 ZNF43P17038 809 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 GLRA1P23415 457 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 ATP6V0CP27449 155 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 PSMB5P28074 263 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 CDAP32320 146 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 CD70P32970 193 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 PTGER4P35408 488 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 SRP14P37108 136 aaKnown RBP3.19□□□□□ -1.9
FOXN3-213ENST00000556916 ACAA2P42765 397 aaKnown RBP3.19□□□□□ -1.9
FOXN3-213ENST00000556916 GPR1P46091 355 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 FHITP49789 147 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 LBX1P52954 281 aa3.19□□□□□ -1.9
FOXN3-213ENST00000556916 EMP2P54851 167 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms