RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OR51A2Q8NGJ7 313 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 OR1S1Q8NH92 325 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 HSPB8Q9UJY1 196 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 R4GMQ9 66 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 RIF1Q5UIP0 2472 aaKnown RBP4.41□□□□□ -1.7
TMEM260-210ENST00000556422 OR6C6A6NF89 314 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 TNFSF15O95150 251 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 ISG15P05161 165 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 FSTP19883 344 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 Q0VFX4 171 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM69Q5SWH9 247 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 CDCP2Q5VXM1 449 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 WDR25Q64LD2 544 aaPredicted RBP4.41□□□□□ -1.7
TMEM260-210ENST00000556422 OR10K2Q6IF99 312 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 FAM71F2Q6NXP2 309 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 OR11H7Q8NGC8 314 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 OR1J4Q8NGS1 313 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 M1APQ8TC57 530 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 PIGTQ969N2 578 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 OR51J1Q9H342 316 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM38BQ9NVV0 291 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 FAM206AQ9NX38 181 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 PSG8Q9UQ74 426 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 ETV7Q9Y603 341 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 LHFPL6Q9Y693 200 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 FREM1Q5H8C1 2179 aa4.41□□□□□ -1.7
TMEM260-210ENST00000556422 PCNX2A6NKB5 2137 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 FXYD6-FXYD2A0A087WZ82 144 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 LOC107986453A0A1B0GWG9 222 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM235A6NFC5 223 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 DHRS7CA6NNS2 312 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 G3V3Y1 287 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 SULT2B1O00204 365 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 SLC17A2O00624 439 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 WIPF1O43516 503 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF205O95201 554 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 CXCL3P19876 107 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 NFYAP23511 347 aaPredicted RBP4.4□□□□□ -1.7
TMEM260-210ENST00000556422 SFTPDP35247 375 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 DUSP3P51452 185 aaPredicted RBP4.4□□□□□ -1.7
TMEM260-210ENST00000556422 CLDN6P56747 220 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 TAS2R20P59543 309 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 RPS18P62269 152 aaKnown RBP4.4□□□□□ -1.7
TMEM260-210ENST00000556422 GSG1Q2KHT4 349 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 NOXO1Q8NFA2 376 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 GNRHR2Q96P88 292 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 RSG1Q9BU20 258 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 FXYD6Q9H0Q3 95 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 ACKR4Q9NPB9 350 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 TAS2R4Q9NYW5 299 aa4.4□□□□□ -1.7
TMEM260-210ENST00000556422 A0A1W2PNU3 283 aaPredicted RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 J3QR89 54 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 M0R2Z0 102 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 HMGB3O15347 200 aaKnown RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 ZIC3O60481 467 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 GFRA3O60609 400 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 GCGP01275 180 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 AMBPP02760 352 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 TTRP02766 147 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 PSG1P11464 419 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 CDAP32320 146 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 ART1P52961 327 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 PRSS12P56730 875 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 B3GNTL1Q67FW5 361 aaPredicted RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 ANKRD16Q6P6B7 361 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 MOB1BQ7L9L4 216 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 SPICQ8N5J4 248 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 OR13C8Q8NGS7 320 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 GALNT14Q96FL9 552 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 S100A16Q96FQ6 103 aaKnown RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 SLC25A44Q96H78 314 aaPredicted RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 LOXL4Q96JB6 756 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 OR5B12Q96R08 314 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 DERL1Q9BUN8 251 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 TMPRSS13Q9BYE2 586 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 PNRC2Q9NPJ4 139 aaKnown RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 CRIM1Q9NZV1 1036 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 SLC45A2Q9UMX9 530 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 V9GYY9 64 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 KMT2EQ8IZD2 1858 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 BSNQ9UPA5 3926 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 CHD3Q12873 2000 aaKnown RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 DSPP15924 2871 aaKnown RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF407Q9C0G0 2248 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 A0A0G2JMM0 328 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 A0A0U1RRA0 63 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM269A0A1B0GVZ9 245 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 A0A1W2PPB8 328 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 A0A1W2PRS3 328 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 MAP1LC3B2A6NCE7 125 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 GGT3PA6NGU5 568 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 KIR3DP1A8MWS1 328 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 XRCC3O43542 346 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 LIFP15018 202 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 TCN2P20062 427 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 NTF3P20783 257 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 ACHEP22303 614 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 AMTP48728 403 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms