RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ACAA1P09110 424 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 TMPRSS7Q7RTY8 843 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 MYPOPQ86VE0 399 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 MRGPRDQ8TDS7 321 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 ABHD14BQ96IU4 210 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 TRIB1Q96RU8 372 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 FKBP11Q9NYL4 201 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 NAT8BQ9UHF3 227 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 CTXND1A0A1B0GTU2 59 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 KIAA1324LA8MWY0 1029 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 DNPH1O43598 174 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 RAMP1O60894 148 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 TUSC5Q8IXB3 177 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 CISD2Q8N5K1 135 aaKnown RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 TP53RKQ96S44 253 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 FSCN3Q9NQT6 498 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 CLCF1Q9UBD9 225 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 FHL1Q13642 323 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 RNPS1Q15287 305 aaKnown RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 IGFBP7Q16270 282 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 ZNF718Q3SXZ3 478 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 KDF1Q8NAX2 398 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 GYPAP02724 150 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 DMWDQ09019 674 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 HABP2Q14520 560 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR5B3Q8NH48 314 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 AURKAIP1Q9NWT8 199 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 FREM3P0C091 2139 aa13.01□□□□□ -0.33
ARHGEF40-207ENST00000556399 TRA2AQ13595 282 aaKnown RBP eCLIP13□□□□□ -0.33
ARHGEF40-207ENST00000556399 DEFB108BQ8NET1 73 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 TM2D1Q9BX74 207 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 FBLN5Q9UBX5 448 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR10J4P0C629 311 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 CCL4P13236 92 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 SPINK14Q6IE38 97 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 APOA2P02652 100 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 TRGC1P0CF51 173 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 DDTP30046 118 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 G6PCP35575 357 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 FGF12P61328 243 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 ZNF385CQ66K41 422 aaPredicted RBP13□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM166AQ6J272 317 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 ARHGEF17Q96PE2 2063 aaPredicted RBP13□□□□□ -0.33
ARHGEF40-207ENST00000556399 CRYAAP02489 173 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 NDUFB7P17568 137 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 GLIPR1P48060 266 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 CCL11P51671 97 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 TDHQ8IZJ6 230 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 NGBQ9NPG2 151 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 WBP1LQ9NX94 342 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 CLEC1BQ9P126 229 aa13□□□□□ -0.33
ARHGEF40-207ENST00000556399 ZNHIT1O43257 154 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 HOXA6P31267 233 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 UCP3P55916 312 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 KLHDC1Q8N7A1 406 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 IGSF23A1L1A6 192 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 NPIPB7O75200 414 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 PGLYRP1O75594 196 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM3BP58499 235 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 PRR27Q6MZM9 219 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 MSL2Q9HCI7 577 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 CRISP2P16562 243 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 RTL8BQ17RB0 113 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR5D13Q8NGL4 314 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 GPR146Q96CH1 333 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 KNTC1P50748 2209 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 J3QT63 122 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 CDIPTO14735 213 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 LDLRAD4O15165 306 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 HNRNPA3P51991 378 aaKnown RBP12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 MEF2BQ02080 365 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 SMRP1Q8NCR6 262 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR10G8Q8NGN5 311 aa12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 H1FXQ92522 213 aaKnown RBP12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 MARS2Q96GW9 593 aaKnown RBP12.99□□□□□ -0.33
ARHGEF40-207ENST00000556399 A0A0A6YYD4 124 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 CYC1P08574 325 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR5G3P0C626 314 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 WDR25Q64LD2 544 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 ZNF818PQ6ZRF7 136 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 NOL4LQ96MY1 436 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 ATP23Q9Y6H3 246 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 HSBP1O75506 76 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 HOXB1P14653 301 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 KLHDC3Q9BQ90 382 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 CLN8Q9UBY8 286 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 GNG4P50150 75 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 LINC00596Q86U02 117 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 TPPP3Q9BW30 176 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 WDR54Q9H977 334 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 GALR2O43603 387 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 RPS23P62266 143 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms