RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TCF23Q7RTU1 214 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 RTN4RL2Q86UN3 420 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 IZUMO1Q8IYV9 350 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 C11orf42Q8N5U0 333 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 Q8N7P7 452 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 RFESDQ8TAC1 157 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 ZNF596Q8TC21 504 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 LHX4Q969G2 390 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 CREB3L1Q96BA8 519 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 TBX15Q96SF7 602 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 CLEC7AQ9BXN2 247 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 MS4A7Q9GZW8 240 aaPredicted RBP6.26□□□□□ -1.41
TDP1-214ENST00000556063 TMEM133Q9H2Q1 129 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 SCPEP1Q9HB40 452 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 Q9N2K0 584 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 IFT46Q9NQC8 304 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 NUP50Q9UKX7 468 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 IGHV1-69DA0A0B4J2H0 117 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 FABP12A6NFH5 140 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 C15orf65H3BRN8 121 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 F2RL2O00254 374 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 SULT1C2O00338 296 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 FABP7O15540 132 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 HSPA12AO43301 675 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 DIRAS3O95661 229 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 AVPP01185 164 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 IGHV1-69P01742 117 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 HLA-DQB1P01920 261 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 LPLP06858 475 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 SRD5A1P18405 259 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 OMGP23515 440 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 ZBTB25P24278 435 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 COX7A1P24310 79 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 CD34P28906 385 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 TNFSF8P32971 234 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 SSTR5P35346 364 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 HLA-DRB3P79483 266 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 HTD2P86397 168 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 IL18Q14116 193 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 HMGN3Q15651 99 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 LTC4SQ16873 150 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 SPANXN2Q5MJ10 180 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 PRAMEF5Q5TYX0 476 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 FOXB2Q5VYV0 432 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 OLFML2AQ68BL7 652 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 PYHIN1Q6K0P9 492 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 Q6ZS49 121 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 SNX29P2Q8IUI4 249 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 LAX1Q8IWV1 398 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 ABHD12Q8N2K0 398 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 PNKDQ8N490 385 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 PRR18Q8N4B5 295 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 OR4A4PQ8NGN8 299 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 OR9G1Q8NH87 305 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 NUDCD2Q8WVJ2 157 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 IL1F10Q8WWZ1 152 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 TNFRSF14Q92956 283 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 KIRREL1Q96J84 757 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 OCSTAMPQ9BR26 566 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 HDHD3Q9BSH5 251 aaPredicted RBP6.25□□□□□ -1.41
TDP1-214ENST00000556063 ST6GALNAC5Q9BVH7 336 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 SUCNR1Q9BXA5 334 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 MIXL1Q9H2W2 232 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 OR2S2Q9NQN1 319 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 JPT1Q9UK76 154 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 FAM96BQ9Y3D0 163 aa6.25□□□□□ -1.41
TDP1-214ENST00000556063 AMMECR1Q9Y4X0 333 aaPredicted RBP6.25□□□□□ -1.41
TDP1-214ENST00000556063 FN1P02751 2386 aaKnown RBP6.25□□□□□ -1.41
TDP1-214ENST00000556063 A0A087X0M5 115 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 IGHV2-26A0A0B4J1V2 119 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 CENPVL3A0A0U1RRI6 287 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 A0A1B0GX30 115 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 INAFM1C9JVW0 142 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 RNASEK-C17orf49H0YIS7 233 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 NPFFO15130 113 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 YPEL1O60688 119 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 CRLF1O75462 422 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 RBBP9O75884 186 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 ARG1P05089 322 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 HOXB4P17483 251 aaPredicted RBP6.24□□□□□ -1.41
TDP1-214ENST00000556063 EPHA1P21709 976 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 PTBP1P26599 531 aaKnown RBP eCLIP6.24□□□□□ -1.415e-6■■□□□ 13.3
TDP1-214ENST00000556063 IL3RAP26951 378 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 CEACAM3P40198 252 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 ARHGDIBP52566 201 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 ARPC4P59998 168 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 ACTBP60709 375 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 ACTG1P63261 375 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 CNPY1Q3B7I2 92 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 MIDNQ504T8 468 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 MINOS1Q5TGZ0 78 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 FAM131AQ6UXB0 335 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 RBMS3Q6XE24 437 aaKnown RBP6.24□□□□□ -1.41
TDP1-214ENST00000556063 C1orf229Q6ZS94 237 aaPredicted RBP6.24□□□□□ -1.41
TDP1-214ENST00000556063 LINC00299Q6ZSB3 139 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 HOGA1Q86XE5 327 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 DTX3Q8N9I9 347 aa6.24□□□□□ -1.41
TDP1-214ENST00000556063 BEST4Q8NFU0 473 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms