RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 EBNA1BP2Q99848 306 aaKnown RBP0.43□□□□□ -2.34
SRP54-207ENST00000555535 MAP1LC3CQ9BXW4 147 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 SLC19A3Q9BZV2 496 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 GAL3ST2Q9H3Q3 398 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 TMBIM4Q9HC24 238 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 CRLF2Q9HC73 371 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 HEY1Q9Y5J3 304 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 ATRNO75882 1429 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 ARFGEF3Q5TH69 2177 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 ARAP3Q8WWN8 1544 aa0.43□□□□□ -2.34
SRP54-207ENST00000555535 MALRD1Q5VYJ5 2156 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 TRGV2A0A075B6R0 118 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 TRAV8-2A0A0B4J237 113 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 DHRS12A0PJE2 317 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 MGAT4DA6NG13 374 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 RFPL4AA6NLU0 287 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 RFPL4AL1F8VTS6 287 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 ZNF593O00488 134 aaPredicted RBP0.42□□□□□ -2.34
SRP54-207ENST00000555535 FGF16O43320 207 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 GATCO43716 136 aaKnown RBP0.42□□□□□ -2.34
SRP54-207ENST00000555535 PDCD6O75340 191 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 NQO1P15559 274 aaKnown RBP0.42□□□□□ -2.34
SRP54-207ENST00000555535 CD36P16671 472 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 ORM2P19652 201 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 PTNP21246 168 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 ELK4P28324 431 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 ACTR1BP42025 376 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 LPAR6P43657 344 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 GCLMP48507 274 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 RPL14P50914 215 aaKnown RBP0.42□□□□□ -2.34
SRP54-207ENST00000555535 TRAM1Q15629 374 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 ACTL10Q5JWF8 245 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 TMEM31Q5JXX7 168 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 HES3Q5TGS1 186 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 HBMQ6B0K9 141 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 DGAT2L6Q6ZPD8 337 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 Q6ZRN7 208 aaPredicted RBP0.42□□□□□ -2.34
SRP54-207ENST00000555535 LRRC28Q86X40 367 aaPredicted RBP0.42□□□□□ -2.34
SRP54-207ENST00000555535 SLC35F6Q8N357 371 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 ZIC4Q8N9L1 334 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 OR6K2Q8NGY2 324 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 OR10A6Q8NH74 314 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 CATSPER2Q96P56 530 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 MGLLQ99685 303 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 PITX2Q99697 317 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 HINT2Q9BX68 163 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 PECRQ9BY49 303 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 PRRG3Q9BZD7 231 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 TM6SF2Q9BZW4 377 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 CXCL16Q9H2A7 254 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 PEF1Q9UBV8 284 aaKnown RBP0.42□□□□□ -2.34
SRP54-207ENST00000555535 PSME2Q9UL46 239 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 KDM5BQ9UGL1 1544 aa0.42□□□□□ -2.34
SRP54-207ENST00000555535 SIPA1L1O43166 1804 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 KIF27Q86VH2 1401 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 A0A1B0GW15 77 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 RAB19A4D1S5 217 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 ARRDC5A6NEK1 342 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 FAM183AA6NL82 134 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 J3QLI3 93 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 hCG_2039718K7EN88 272 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 PLPP3O14495 311 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 TCF21O43680 179 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 CD8AP01732 235 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 SLC25A16P16260 332 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 TTPAP49638 278 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 RAP1GDS1P52306 607 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 ACTBP60709 375 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 DSTNP60981 165 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 ACTG1P63261 375 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 ZNF117Q03924 483 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 SLC38A11Q08AI6 406 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 PDK2Q15119 407 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 PDGFRLQ15198 375 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 MMDQ15546 238 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 UAP1Q16222 522 aaPredicted RBP0.41□□□□□ -2.34
SRP54-207ENST00000555535 MAPK14Q16539 360 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 EBLN2Q6P2I7 272 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 FAHD1Q6P587 224 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 AGTRAPQ6RW13 159 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 RASL11AQ6T310 242 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 FAM19A1Q7Z5A9 133 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 VN1R4Q7Z5H5 301 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 DOLPP1Q86YN1 238 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 TRIML2Q8N7C3 387 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 OR11H1Q8NG94 326 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 OR4K17Q8NGC6 315 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 OR5D18Q8NGL1 313 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 OR9I1Q8NGQ6 314 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 CD200R1Q8TD46 325 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 C16orf78Q8WTQ4 265 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 IFT81Q8WYA0 676 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 TOP1MTQ969P6 601 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 CLDN23Q96B33 292 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 MRPS24Q96EL2 167 aaKnown RBP0.41□□□□□ -2.34
SRP54-207ENST00000555535 HSPB9Q9BQS6 159 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 FAAP24Q9BTP7 215 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 MED18Q9BUE0 208 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 TIMM21Q9BVV7 248 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 SUCNR1Q9BXA5 334 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms