RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 ABHD14BQ96IU4 210 aa20.21■□□□□ 0.83
STRN3-207ENST00000555358 SPIN2AQ99865 258 aa20.21■□□□□ 0.83
STRN3-207ENST00000555358 SPIN2BQ9BPZ2 258 aa20.21■□□□□ 0.83
STRN3-207ENST00000555358 SPTBN4Q9H254 2564 aa20.2■□□□□ 0.83
STRN3-207ENST00000555358 BSNQ9UPA5 3926 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 CLEC18AA5D8T8 446 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 ADAM20O43506 726 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 C1QL4Q86Z23 238 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 CLEC18CQ8NCF0 446 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 CPEB3Q8NE35 698 aaKnown RBP20.2■□□□□ 0.82
STRN3-207ENST00000555358 MAGT1Q9H0U3 335 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 Q9N2K0 584 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 GTF3C1Q12789 2109 aa20.2■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A10PA6NDY2 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A18PA6NE21 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A16PA6NEW6 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A20PA6NIJ5 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A8PA6NJQ4 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A7PA6NKC0 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A22PA8MWA6 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A12PA8MX19 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A5PA8MXJ8 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A23PA8MXZ1 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 NAPSAO96009 420 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A15PP0C7V4 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A13PP0C7W8 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A14PP0C7W9 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FAM90A24PP0C7X0 464 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 SRSF7Q16629 238 aaKnown RBP eCLIP20.19■□□□□ 0.827e-7■■■■□ 22.8
STRN3-207ENST00000555358 NMSQ5H8A3 153 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 HEPN1Q6WQI6 88 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 GAPTQ8N292 157 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 GPHA2Q96T91 129 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 SLC25A31Q9H0C2 315 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 NIT2Q9NQR4 276 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 AP4M1O00189 453 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 CLN5O75503 358 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 OR2C1O95371 312 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 TMEM50AO95807 157 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 BCL3P20749 454 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 HERPUD1Q15011 391 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 SPIN3Q5JUX0 258 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 OR5C1Q8NGR4 320 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 PLPPR1Q8TBJ4 325 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 SLAMF9Q96A28 289 aa20.19■□□□□ 0.82
STRN3-207ENST00000555358 FGF23Q9GZV9 251 aaPredicted RBP20.19■□□□□ 0.82
STRN3-207ENST00000555358 IGKV1D-13A0A0B4J2D9 117 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 AQP7O14520 342 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 SCTP09683 121 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 IGKV1-13P0DP09 117 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 EIF2S3P41091 472 aaKnown RBP20.18■□□□□ 0.82
STRN3-207ENST00000555358 COLCA1Q6ZS62 124 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 SPACA3Q8IXA5 215 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 HS3ST6Q96QI5 342 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 KIAA1456Q9P272 454 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 CLCF1Q9UBD9 225 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 BTBD17A6NE02 478 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 ZNF503-AS2A6NEH8 195 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 ZNF732B4DXR9 585 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 EPHA1P21709 976 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 DYNLT3P51808 116 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 ID3Q02535 119 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 P4HA3Q7Z4N8 544 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 RBMXL3Q8N7X1 1067 aaKnown RBP20.18■□□□□ 0.82
STRN3-207ENST00000555358 MUCL1Q96DR8 90 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 TRIB1Q96RU8 372 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 SSUH2Q9Y2M2 353 aa20.18■□□□□ 0.82
STRN3-207ENST00000555358 TUSC2O75896 110 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 TK1P04183 234 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 SRP19P09132 144 aaKnown RBP20.17■□□□□ 0.82
STRN3-207ENST00000555358 UCP1P25874 307 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 Q6ZS92 163 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 GCNT2Q8N0V5 402 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 CRIM1Q9NZV1 1036 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 DUXBA0A1W2PPF3 345 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 PPIHO43447 177 aaKnown RBP20.17■□□□□ 0.82
STRN3-207ENST00000555358 VAMP2P63027 116 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 HAGHQ16775 308 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 NRN1LQ496H8 165 aa20.17■□□□□ 0.82
STRN3-207ENST00000555358 H3BQ15 152 aa20.16■□□□□ 0.82
STRN3-207ENST00000555358 HSD17B6O14756 317 aa20.16■□□□□ 0.82
STRN3-207ENST00000555358 HSPA12AO43301 675 aa20.16■□□□□ 0.82
STRN3-207ENST00000555358 CST7O76096 145 aa20.16■□□□□ 0.82
STRN3-207ENST00000555358 HLA-HP01893 362 aa20.16■□□□□ 0.82
STRN3-207ENST00000555358 OR56B2PQ8NGI1 322 aa20.16■□□□□ 0.82
STRN3-207ENST00000555358 IFNA17P01571 189 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 FGF12P61328 243 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 TCTEX1D2Q8WW35 142 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 RAB39BQ96DA2 213 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 OR51M1Q9H341 326 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 IGKV1-6A0A0C4DH72 117 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 SLC34A2O95436 690 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 MMP9P14780 707 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 VDAC1P21796 283 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 RUNX1Q01196 453 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 BAXQ07812 192 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 ICAM4Q14773 271 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 UNKLQ9H9P5 680 aaKnown RBP20.15■□□□□ 0.82
STRN3-207ENST00000555358 IL36RNQ9UBH0 155 aa20.15■□□□□ 0.82
STRN3-207ENST00000555358 MAP1BP46821 2468 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms