RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NXF2Q9GZY0 626 aaKnown RBP2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 ASB7Q9H672 318 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 FAM60AQ9NP50 221 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 AGPAT3Q9NRZ7 376 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 MYO5AQ9Y4I1 1855 aaKnown RBP2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 ASH1LQ9NR48 2969 aaKnown RBP2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 MYH8P13535 1937 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 DOCK3Q8IZD9 2030 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 LOC285556D6RIA3 1793 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 PHIPQ8WWQ0 1821 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 MYH4Q9Y623 1939 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 VPS37CA5D8V6 355 aaPredicted RBP2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 TRAPPC3O43617 180 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 COX7A2P2O60397 106 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 YEATS4O95619 227 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 SYT1P21579 422 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 PPP1R2P41236 205 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 SSX1Q16384 188 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 FA2HQ7L5A8 372 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 FAM19A1Q7Z5A9 133 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 DRAXINQ8NBI3 349 aaPredicted RBP2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 OR8G5Q8NG78 346 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 DNAJB3Q8WWF6 145 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 YPEL4Q96NS1 127 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 LXNQ9BS40 222 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 PRRG3Q9BZD7 231 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 LHX5Q9H2C1 402 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 GOLPH3Q9H4A6 298 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 DIABLOQ9NR28 239 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 DDX60LQ5H9U9 1706 aaKnown RBP2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZNF236Q9UL36 1845 aa2.82□□□□□ -1.96
CKS1BP1-201ENST00000555221 PTPRFP10586 1907 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 CD300LBA8K4G0 201 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 FAM25EA8MYX2 175 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZNF879B4DU55 563 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 hCG_2039718K7EN88 272 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 CCL23P55773 120 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 RAB38P57729 211 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 TSPAN5P62079 268 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 BNIP2Q12982 314 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 ITGB3BPQ13352 177 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 TTMPQ5BVD1 217 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 UBE2NLQ5JXB2 153 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 DEFB128Q7Z7B8 93 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 CD302Q8IX05 232 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 ITLN2Q8WWU7 325 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 TNFRSF14Q92956 283 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 PARVGQ9HBI0 331 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 TMEM38BQ9NVV0 291 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 GINS2Q9Y248 185 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 LAMB1P07942 1786 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 ATAD5Q96QE3 1844 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 CDK5RAP2Q96SN8 1893 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 TRIP11Q15643 1979 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 TPRP12270 2363 aaKnown RBP2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 SPTBN4Q9H254 2564 aa2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 ANKRD17O75179 2603 aaKnown RBP2.81□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZNF462Q96JM2 2506 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 OTOFQ9HC10 1997 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 TICRRQ7Z2Z1 1910 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 SIPA1L1O43166 1804 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 PVALEFA0A1B0GWK0 134 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 FSTL3O95633 263 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 IMPA1P29218 277 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 TTPAP49638 278 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 ACOT2P49753 483 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 PSG3Q16557 428 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 Q499Y3 187 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 CLEC18BQ6UXF7 455 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 LINC00596Q86U02 117 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZFP62Q8NB50 900 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 CLHC1Q8NHS4 586 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 BLNKQ8WV28 456 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 TMEM239Q8WW34 195 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 NELFBQ8WX92 580 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 SHANK2-AS3Q9BTD1 123 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 CCDC94Q9BW85 323 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 ANGPTL4Q9BY76 406 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 TAS2R1Q9NYW7 299 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 CHMP5Q9NZZ3 219 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 CLEC2DQ9UHP7 191 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 SLC22A14Q9Y267 594 aa2.8□□□□□ -1.96
CKS1BP1-201ENST00000555221 REV3LO60673 3130 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 PRUNE2Q8WUY3 3088 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZNF233A6NK53 670 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 VGLL3A8MV65 326 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 STX10O60499 249 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 PRTN3P24158 256 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 IL12BP29460 328 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 PRKCDQ05655 676 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 HBMQ6B0K9 141 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 SPICQ8N5J4 248 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 DEFB123Q8N688 67 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 SPERTQ8NA61 448 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 LINC00301Q8NCQ3 95 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 OR4K17Q8NGC6 315 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 PHF10Q8WUB8 498 aaKnown RBP2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 RBPMSQ93062 196 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms