RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 H7C2Y5 167 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 IFNA2P01563 188 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 ZNF44P15621 663 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 SERPINF1P36955 418 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 PIGPP57054 158 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 FGL1Q08830 312 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 MST1LQ2TV78 715 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 PAN3Q58A45 887 aaKnown RBP7.45□□□□□ -1.22
TDP1-210ENST00000554976 ZNF818PQ6ZRF7 136 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 LRRC29Q8WV35 223 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 ELMOD3Q96FG2 381 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 RNF126Q9BV68 326 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 OR51M1Q9H341 326 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 GCM1Q9NP62 436 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 TNFSF18Q9UNG2 199 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 C14orf166Q9Y224 244 aaKnown RBP7.45□□□□□ -1.22
TDP1-210ENST00000554976 RNF222A6NCQ9 220 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 ADAP1O75689 374 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 HEXAP06865 529 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 CTXN2P0C2S0 81 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 PSG2P11465 335 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 VAMP1P23763 118 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 S100PP25815 95 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 COL10A1Q03692 680 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 C11orf87Q6NUJ2 197 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 WFDC8Q8IUA0 241 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 ITLN1Q8WWA0 313 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 CHMP1AQ9HD42 196 aaPredicted RBP7.45□□□□□ -1.22
TDP1-210ENST00000554976 OR1A1Q9P1Q5 309 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 ZDHHC8Q9ULC8 765 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 DSCAMO60469 2012 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 DYSFO75923 2080 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 HEATR1Q9H583 2144 aaKnown RBP7.45□□□□□ -1.22
TDP1-210ENST00000554976 TRGV8A0A0C4DH27 118 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 H0YIZ8 118 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 C15orf65H3BRN8 121 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 H7C1Q1 480 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 SORDQ00796 357 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 ATXN7L3Q14CW9 347 aaPredicted RBP7.44□□□□□ -1.22
TDP1-210ENST00000554976 TEX36Q5VZQ5 186 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 EIF4E3Q8N5X7 224 aaKnown RBP7.44□□□□□ -1.22
TDP1-210ENST00000554976 BVESQ8NE79 360 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 NANPQ8TBE9 248 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 CASTOR1Q8WTX7 329 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 GLYATL2Q8WU03 294 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 MLXQ9UH92 298 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 URB1O60287 2271 aaKnown RBP7.44□□□□□ -1.22
TDP1-210ENST00000554976 TNFRSF13BO14836 293 aaPredicted RBP7.44□□□□□ -1.22
TDP1-210ENST00000554976 SNAPC5O75971 98 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 IGHV2-70P01814 119 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 S100A8P05109 93 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 PGAM2P15259 253 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 GRNP28799 593 aaKnown RBP7.44□□□□□ -1.22
TDP1-210ENST00000554976 CHRNB4P30926 498 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 ZNF81P51508 661 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 ZNF345Q14585 488 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 SMIM21Q3B7S5 101 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 STUMQ69YW2 141 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 RNASE6Q93091 150 aaKnown RBP7.44□□□□□ -1.22
TDP1-210ENST00000554976 C5orf30Q96GV9 206 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 KIRREL1Q96J84 757 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 TP53RKQ96S44 253 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 UFSP2Q9NUQ7 469 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 DUSP13Q9UII6 198 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 RELNP78509 3460 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 NBEAQ8NFP9 2946 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 TEX13DA0A0J9YY54 714 aaPredicted RBP7.44□□□□□ -1.22
TDP1-210ENST00000554976 E7EQL1 145 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 FCN3O75636 299 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 FGF2P09038 288 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 OR5AC1P0C628 307 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 SSTR2P30874 369 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 LY6DQ14210 128 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 MOGAT3Q86VF5 341 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 TGIF2LYQ8IUE0 185 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 FAM185AQ8N0U4 392 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 COQ8AQ8NI60 647 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 PPP1R1CQ8WVI7 109 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 TMEM56Q96MV1 263 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 TMEM204Q9BSN7 226 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 NCOR1P1Q9H4R4 102 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 C11orf1Q9H5F2 150 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 OR2W1Q9Y3N9 320 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 TMEM56-RWDD3S4R434 201 aa7.44□□□□□ -1.22
TDP1-210ENST00000554976 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 OR4A8P0C604 315 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 CGB3P0DN86 165 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 CGB7P0DN87 165 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 GLP1RP43220 463 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 EFNB3Q15768 340 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 HFEQ30201 348 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 VHLLQ6RSH7 139 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 KCTD9Q7L273 389 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 RTN4IP1Q8WWV3 396 aaPredicted RBP7.43□□□□□ -1.22
TDP1-210ENST00000554976 TOMM40LQ969M1 308 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 ERGIC1Q969X5 290 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 SUCNR1Q9BXA5 334 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 PARP12Q9H0J9 701 aaKnown RBP7.43□□□□□ -1.22
TDP1-210ENST00000554976 TRAV39A0A0B4J263 110 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms