RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 NUP37Q8NFH4 326 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 TMEM171Q8WVE6 324 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 GTF3AQ92664 365 aaKnown RBP14.68□□□□□ -0.06
SHOX-204ENST00000554971 CYYR1Q96J86 154 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 CDH20Q9HBT6 801 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 LPAR3Q9UBY5 353 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 H7C1Q1 480 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 PLATP00750 562 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 RPL12P30050 165 aaKnown RBP14.67□□□□□ -0.06
SHOX-204ENST00000554971 FCGR2CP31995 323 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 UCP2P55851 309 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 BLOC1S1P78537 153 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 MPV17LQ2QL34 196 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 GPR157Q5UAW9 335 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 LIAT1Q6ZQX7 453 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 MKXQ8IYA7 352 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.67□□□□□ -0.06
SHOX-204ENST00000554971 SMIM8Q96KF7 97 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 RSRP1Q9BUV0 290 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 RIMS4Q9H426 269 aaPredicted RBP14.67□□□□□ -0.06
SHOX-204ENST00000554971 PLK3Q9H4B4 646 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 FBXO9Q9UK97 447 aaPredicted RBP14.67□□□□□ -0.06
SHOX-204ENST00000554971 ITPR3Q14573 2671 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 ZANQ9Y493 2812 aa14.67□□□□□ -0.06
SHOX-204ENST00000554971 E5RGE8 158 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 HS3ST1O14792 307 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 FGF12P61328 243 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 SLC25A26Q70HW3 274 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 MRPL21Q7Z2W9 205 aaKnown RBP14.66□□□□□ -0.06
SHOX-204ENST00000554971 OR5T2Q8NGG2 359 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 OR5A2Q8NGI9 324 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 TMED6Q8WW62 240 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 UBTD1Q9HAC8 227 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 PRR13Q9NZ81 148 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 NSG2Q9Y328 171 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 ATP23Q9Y6H3 246 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 PIGBOS1A0A0B4J2F0 54 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 ATG12O94817 140 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 GLAP06280 429 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 CTXN2P0C2S0 81 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 DANCRP0C864 163 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 HERV-K104P61576 105 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 C10orf91Q5T1B1 145 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 VHLLQ6RSH7 139 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 ZDHHC23Q8IYP9 409 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 SVBPQ8N300 66 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 C18orf12Q96KH6 178 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 ZNF442Q9H7R0 627 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 TAF9BQ9HBM6 251 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 SPACA1Q9HBV2 294 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 ZC4H2Q9NQZ6 224 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 SLC2A9Q9NRM0 540 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 TMED3Q9Y3Q3 217 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 POMT1Q9Y6A1 747 aa14.66□□□□□ -0.06
SHOX-204ENST00000554971 KCNAB3O43448 404 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 SOD3P08294 240 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 GLRXP35754 106 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 PJVKQ0ZLH3 352 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 PRDX4Q13162 271 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 ADIPOQQ15848 244 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 CALHM1Q8IU99 346 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 OR56B2PQ8NGI1 322 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 HIST1H2AAQ96QV6 131 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 PAPOLGQ9BWT3 736 aaKnown RBP14.65□□□□□ -0.06
SHOX-204ENST00000554971 RHOFQ9HBH0 211 aa14.65□□□□□ -0.06
SHOX-204ENST00000554971 RCC2Q9P258 522 aaKnown RBP14.65□□□□□ -0.06
SHOX-204ENST00000554971 TSPAN4O14817 238 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 OR7C1O76099 320 aaPredicted RBP14.64□□□□□ -0.07
SHOX-204ENST00000554971 DUSP1P28562 367 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 SULT1A2P50226 295 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 RND3P61587 244 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 IL13RA2Q14627 380 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 SPATA46Q5T0L3 261 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 PXDC1Q5TGL8 231 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 SPAG16Q8N0X2 631 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 UBAC2Q8NBM4 344 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 IGFBPL1Q8WX77 278 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 TOMM40LQ969M1 308 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 MRPL24Q96A35 216 aaKnown RBP14.64□□□□□ -0.07
SHOX-204ENST00000554971 FZR1Q9UM11 496 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 MPC1Q9Y5U8 109 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 ZNF705EA8MWA4 302 aaPredicted RBP14.64□□□□□ -0.07
SHOX-204ENST00000554971 J3QW42 95 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 DIRAS3O95661 229 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 OR5AC1P0C628 307 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 LRP11Q86VZ4 500 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 BHLHE23Q8NDY6 225 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 MSI2Q96DH6 328 aaKnown RBP14.64□□□□□ -0.07
SHOX-204ENST00000554971 MARS2Q96GW9 593 aaKnown RBP14.64□□□□□ -0.07
SHOX-204ENST00000554971 NKX6-2Q9C056 277 aaPredicted RBP14.64□□□□□ -0.07
SHOX-204ENST00000554971 OR2J1Q9GZK6 312 aa14.64□□□□□ -0.07
SHOX-204ENST00000554971 CARHSP1Q9Y2V2 147 aaKnown RBP14.64□□□□□ -0.07
SHOX-204ENST00000554971 SVEP1Q4LDE5 3571 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 KIR2DS1A0A191URI9 304 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 KIR2DS4P43632 304 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 DEFA5Q01523 94 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 KIR2DS1Q14954 304 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 MST1LQ2TV78 715 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 TMEM268Q5VZI3 342 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 OR5L1Q8NGL2 311 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms