RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 FLYWCH2Q96CP2 140 aaKnown RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 MRPL37Q9BZE1 423 aaKnown RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 RHBDL1O75783 438 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 AREGP15514 252 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 RIGQ13278 110 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 DEFB123Q8N688 67 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 ADAMTS17Q8TE56 1095 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 AURKAIP1Q9NWT8 199 aaPredicted RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 RCC2Q9P258 522 aaKnown RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 KIAA0100Q14667 2235 aaKnown RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 IFI6P09912 130 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 FUT5Q11128 374 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 A0A0U1RQV5 110 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 ERVH48-1M5A8F1 160 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 CDIPTO14735 213 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 MMP9P14780 707 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 RCC1P18754 421 aaPredicted RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 HOXA6P31267 233 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 MPLP40238 635 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF273Q14593 569 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 SPINK14Q6IE38 97 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 CT55Q8WUE5 264 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 KCNK7Q9Y2U2 307 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 F5P12259 2224 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 ARFGEF1Q9Y6D6 1849 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 MFSD2BA6NFX1 497 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 K7ESF4 209 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 DNASE2O00115 360 aaPredicted RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 CXorf1O96002 111 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 LIFP15018 202 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 MUC1P15941 1255 aaPredicted RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 RBM11P57052 281 aaKnown RBP12.19□□□□□ -0.46
VTI1B-204ENST00000554659 ROM1Q03395 351 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 NSUN5P2Q63ZY6 315 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 WDR31Q8NA23 367 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 TCFL5Q9UL49 500 aa12.19□□□□□ -0.46
VTI1B-204ENST00000554659 MYO7AQ13402 2215 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 IGKV1-8A0A0C4DH67 115 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 SMPD2O60906 423 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 FCGR3AP08637 254 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 NPY1RP25929 384 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 OR52L2PQ8NGH6 319 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 FAM157AC9JC47 383 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 MOSPD3O75425 235 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF205O95201 554 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 ORM1P02763 201 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 COL5A1-AS1Q5SY13 56 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 OR1L1Q8NH94 360 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 ABHD3Q8WU67 409 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 CCL17Q92583 94 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 RNF122Q9H9V4 155 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 HSPB8Q9UJY1 196 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 ICE1Q9Y2F5 2266 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 TMEM210A6NLX4 147 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 CCL3P10147 92 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 CD1BP29016 333 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 CEACAM3P40198 252 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 SERF2P84101 59 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 IFITM2Q01629 132 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 TNXAQ16473 311 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 TMEM255AQ5JRV8 349 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 UCN2Q96RP3 112 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 PSG2P11465 335 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 DOLPP1Q86YN1 238 aa12.18□□□□□ -0.46
VTI1B-204ENST00000554659 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
VTI1B-204ENST00000554659 ASXL3Q9C0F0 2248 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 TRAV38-1A0A0B4J264 116 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 F12P00748 615 aaPredicted RBP12.17□□□□□ -0.46
VTI1B-204ENST00000554659 SPINK2P20155 84 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 GABRA6Q16445 453 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 SLC25A38Q96DW6 304 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 WDR54Q9H977 334 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 BCL2P10415 239 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 COMPP49747 757 aaPredicted RBP12.17□□□□□ -0.46
VTI1B-204ENST00000554659 HDHD3Q9BSH5 251 aaPredicted RBP12.17□□□□□ -0.46
VTI1B-204ENST00000554659 SLC25A33Q9BSK2 321 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 ZFC3H1O60293 1989 aaKnown RBP12.17□□□□□ -0.46
VTI1B-204ENST00000554659 APCSP02743 223 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 TCTAP57738 103 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 GUCA2BQ16661 112 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF788Q6ZQV5 615 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF519Q8TB69 540 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 GPR132Q9UNW8 380 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 SRSF10O75494 262 aaKnown RBP12.17□□□□□ -0.46
VTI1B-204ENST00000554659 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF137PP52743 207 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 FAM3BP58499 235 aaPredicted RBP12.17□□□□□ -0.46
VTI1B-204ENST00000554659 C1orf100Q5SVJ3 147 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
VTI1B-204ENST00000554659 OR5AC2Q9NZP5 309 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms