RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 NOTCH3Q9UM47 2321 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 CENPXA8MT69 81 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF732B4DXR9 585 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 PLA2G10O15496 165 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 LYRM1O43325 122 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 ANGPTL7O43827 346 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 CHST1O43916 411 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 CRTAPO75718 401 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-215ENST00000554656 RBBP9O75884 186 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 CSTBP04080 98 aaKnown RBP8.58□□□□□ -1.04
SHMT2-215ENST00000554656 GTF2F2P13984 249 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 GLRA1P23415 457 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 GDNFP39905 211 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 RSU1Q15404 277 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 LY6EQ16553 131 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 C2orf68Q2NKX9 166 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF260Q3ZCT1 412 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF57Q68EA5 555 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-215ENST00000554656 OR10K2Q6IF99 312 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 IZUMO1Q8IYV9 350 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 FAM185AQ8N0U4 392 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 TOMM5Q8N4H5 51 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 C11orf42Q8N5U0 333 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 CD177Q8N6Q3 437 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 TMEM104Q8NE00 496 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 DUSP18Q8NEJ0 188 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 TMEM185AQ8NFB2 350 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 OR52I2Q8NH67 350 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 AQP3Q92482 292 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 SDSLQ96GA7 329 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 Q96M66 194 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 NKX3-1Q99801 234 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-215ENST00000554656 SSX3Q99909 188 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 KCNK15Q9H427 330 aa8.58□□□□□ -1.04
SHMT2-215ENST00000554656 ANKRD20A5PA0PJZ0 165 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 FOXI3A8MTJ6 420 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-215ENST00000554656 G3V4G9 280 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 J3QT63 122 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 SYNGR1O43759 233 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 LANCL1O43813 399 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 ORC5O43913 435 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 LPLP06858 475 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 CSF1P09603 554 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 FAUP35544 74 aaKnown RBP8.57□□□□□ -1.04
SHMT2-215ENST00000554656 CBX5P45973 191 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 CEBPDP49716 269 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-215ENST00000554656 VEGFCP49767 419 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 ERVFRD-1P60508 538 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 IL24Q13007 206 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 MADCAM1Q13477 382 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 KLF9Q13886 244 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-215ENST00000554656 BEAN1Q3B7T3 259 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 HAGHLQ6PII5 290 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-215ENST00000554656 ACP7Q6ZNF0 438 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 GDPD3Q7L5L3 318 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 LINC00596Q86U02 117 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 Q8IYB0 196 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 OSR2Q8N2R0 312 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 DTX3Q8N9I9 347 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 OR51T1Q8NGJ9 327 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 OR5D18Q8NGL1 313 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 PIFOQ8TCI5 191 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 CFHR4Q92496 578 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 C11orf54Q9H0W9 315 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-215ENST00000554656 MEGF9Q9H1U4 602 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 COPZ2Q9P299 210 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 HSF4Q9ULV5 492 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 POLDIP2Q9Y2S7 368 aa8.57□□□□□ -1.04
SHMT2-215ENST00000554656 TRBV23-1A0A0A0MS06 115 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 A0A0A6YYD4 124 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 RFPL4AA6NLU0 287 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 SERPINE3A8MV23 424 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 RFPL4AL1F8VTS6 287 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 MFNGO00587 321 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 HTR3BO95264 441 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 CD3GP09693 182 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 HIST1H1DP16402 221 aaKnown RBP8.56□□□□□ -1.04
SHMT2-215ENST00000554656 CCL3L1P16619 93 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 SERPINA2P20848 420 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 HAAOP46952 286 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 RFX2P48378 723 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF273Q14593 569 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 IL13RA2Q14627 380 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 HERPUD1Q15011 391 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 LRRC75BQ2VPJ9 315 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 CDNFQ49AH0 187 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 LDLRAD2Q5SZI1 272 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 CCBE1Q6UXH8 406 aaPredicted RBP8.56□□□□□ -1.04
SHMT2-215ENST00000554656 Q6ZTK2 550 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 NRARPQ7Z6K4 114 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 CALHM1Q8IU99 346 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 BATF2Q8N1L9 274 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 DYNAPQ8N1N2 210 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 KLHDC1Q8N7A1 406 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 POC1AQ8NBT0 407 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 OR5D13Q8NGL4 314 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 ENKURQ8TC29 256 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms