RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 EMX1Q04741 257 aaPredicted RBP8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 C6orf183Q5T699 404 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 RAB12Q6IQ22 244 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 NDUFA11Q86Y39 141 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 OR10X1Q8NGY0 326 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 RFESDQ8TAC1 157 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 FAM110DQ8TAY7 271 aaPredicted RBP8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 LEAP2Q969E1 77 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 ARL11Q969Q4 196 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 Q96M66 194 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 OR5M11Q96RB7 305 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 SELENOIQ9C0D9 397 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 CST11Q9H112 138 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 ISYNA1Q9NPH2 558 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 ETAA1Q9NY74 926 aa8.31□□□□□ -1.08
PTCD2P1-201ENST00000554393 NOTCH3Q9UM47 2321 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 BIRC6Q9NR09 4857 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 SDCBPO00560 298 aaPredicted RBP8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 PDCD6O75340 191 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 CRTAPO75718 401 aaPredicted RBP8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 AMY1AP04745 511 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 AMY2AP04746 511 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 CD37P11049 281 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 FUT3P21217 361 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 HSPA13P48723 471 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 GP2P55259 537 aaKnown RBP8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 LOXL3P58215 753 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 ZNF816Q0VGE8 651 aaPredicted RBP8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 MED22Q15528 200 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 TRAM1Q15629 374 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 LTC4SQ16873 150 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 C1orf100Q5SVJ3 147 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 GLT8D1Q68CQ7 371 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 Q6ZS46 218 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 LRRTM1Q86UE6 522 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 C11orf44Q8N8P7 122 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 TMEM104Q8NE00 496 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 UFD1Q92890 307 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 TMED9Q9BVK6 235 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 GFOD1Q9NXC2 390 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 MOB4Q9Y3A3 225 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 PEX16Q9Y5Y5 336 aa8.3□□□□□ -1.08
PTCD2P1-201ENST00000554393 TRAV39A0A0B4J263 110 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 C12orf77C9JDV5 145 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 HSD17B6O14756 317 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 SPINT2O43291 252 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 FGF16O43320 207 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 TXNL1O43396 289 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 RGS10O43665 173 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 IGHV3-7P01780 117 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 GAPDHP04406 335 aaKnown RBP8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 SNRNP70P08621 437 aaKnown RBP8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 UCHL1P09936 223 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 CD28P10747 220 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 SRMP19623 302 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 CRHBPP24387 322 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 PSMA1P25786 263 aaKnown RBP8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 IL3RAP26951 378 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 GNG10P50151 68 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 ZNF137PP52743 207 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 TPBGQ13641 420 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 INSL4Q14641 139 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 ABCA11PQ4W5N1 156 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 HSD17B12Q53GQ0 312 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 FBLN7Q53RD9 439 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 RBM48Q5RL73 367 aaKnown RBP8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 FAM27D1Q5T7N8 215 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 SYT6Q5T7P8 510 aaPredicted RBP8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 STEAP3Q658P3 488 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 SIGIRRQ6IA17 410 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 PRSS48Q7RTY5 328 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 CEACAM19Q7Z692 300 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 IZUMO1Q8IYV9 350 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 OR56B4Q8NH76 319 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 CCDC107Q8WV48 283 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 BANF2Q9H503 90 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 MBNL3Q9NUK0 354 aaKnown RBP8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 TRAPPC2LQ9UL33 140 aa8.29□□□□□ -1.08
PTCD2P1-201ENST00000554393 CCRL2O00421 344 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 SLC22A1O15245 554 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 ARL6IP5O75915 188 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 LPLP06858 475 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 CPEP16870 476 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 TMEM11P17152 192 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 CD83Q01151 205 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 MLLT11Q13015 90 aaPredicted RBP8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 EBI3Q14213 229 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 DIAPH2-AS1Q14236 149 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 TMEM95Q3KNT9 176 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 SLC25A48Q6ZT89 311 aaKnown RBP8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 DRAM1Q8N682 238 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 OR4F17Q8NGA8 305 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 OR5AU1Q8NGC0 362 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 OR6M1Q8NGM8 313 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 KCNG3Q8TAE7 436 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 SGCDQ92629 289 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 ST6GALNAC6Q969X2 333 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 OR4F4Q96R69 305 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms