RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 CASQ2O14958 399 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 SLC31A2O15432 143 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 CRTAPO75718 401 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 GAPDHP04406 335 aaKnown RBP9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 CD1AP06126 327 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 MGMTP16455 207 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 ZNF816Q0VGE8 651 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 INSL4Q14641 139 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 SYT6Q5T7P8 510 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 REC114Q7Z4M0 266 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 CDH26Q8IXH8 852 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 C8orf31Q8N9H6 132 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 OR4K15Q8NH41 348 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 OR1L1Q8NH94 360 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 TFAP2CQ92754 450 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 ST6GALNAC6Q969X2 333 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 MRPS24Q96EL2 167 aaKnown RBP9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 EAF1Q96JC9 268 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 NECAP2Q9NVZ3 263 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 FKBP14Q9NWM8 211 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 ETAA1Q9NY74 926 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 LINC00527Q9UJ94 153 aa9.41□□□□□ -0.9
TRAPPC6B-204ENST00000554018 LINC01548A6NM66 108 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 SERPINE3A8MV23 424 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 FGF16O43320 207 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 PF4P02776 101 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 RCC1P18754 421 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 FUT3P21217 361 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 ZNF134P52741 427 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 GP2P55259 537 aaKnown RBP9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 EBI3Q14213 229 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 FAM27D1Q5T7N8 215 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 FOXB2Q5VYV0 432 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 SIGIRRQ6IA17 410 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 C5orf24Q7Z6I8 188 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 PRR18Q8N4B5 295 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 RTN4IP1Q8WWV3 396 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 FAM46BQ96A09 425 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 RBMXL1Q96E39 390 aaKnown RBP9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 Q96M66 194 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 TRAPPC2LQ9UL33 140 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 ERGIC3Q9Y282 383 aa9.4□□□□□ -0.9
TRAPPC6B-204ENST00000554018 TENM3Q9P273 2699 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 UBE2QL1A1L167 161 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 FAM90A10PA6NDY2 464 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 FAM90A7PA6NKC0 464 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 FAM90A23PA8MXZ1 464 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 ZNF736B4DX44 427 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 PTGES3LE9PB15 166 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 SPINT2O43291 252 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 IGHG2P01859 326 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 HBZP02008 142 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 IL3RAP26951 378 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 ACSM3Q53FZ2 586 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 CT45A1Q5HYN5 189 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 C6orf183Q5T699 404 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 IZUMO1Q8IYV9 350 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 GAPTQ8N292 157 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 Q8N6K4 173 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 NKAIN3Q8N8D7 197 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 ZNF439Q8NDP4 499 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 OR2T10Q8NGZ9 312 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 CT45A3Q8NHU0 189 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 MRAPQ8TCY5 172 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 CHPT1Q8WUD6 406 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 UQCC2Q9BRT2 126 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 GNG12Q9UBI6 72 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 NKX1-2Q9UD57 310 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 NBEAL2Q6ZNJ1 2754 aa9.39□□□□□ -0.91
TRAPPC6B-204ENST00000554018 SC5DO75845 299 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 GLAP06280 429 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 CDK1P06493 297 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 MAPK3P27361 379 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 GPR12P47775 334 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 GABPB1Q06547 395 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 RNLSQ5VYX0 342 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 OR10K2Q6IF99 312 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 UNQ9370/PRO34162Q6UXP9 181 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 SLC25A48Q6ZT89 311 aaKnown RBP9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 C18orf65Q6ZTR6 163 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 TGIF2LXQ8IUE1 241 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 THRSPQ92748 146 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 TMED9Q9BVK6 235 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 MND1Q9BWT6 205 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 TAF9BQ9HBM6 251 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 PLSCR3Q9NRY6 295 aa9.38□□□□□ -0.91
TRAPPC6B-204ENST00000554018 H0YHG0 523 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 PDCD6O75340 191 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 CA11O75493 328 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 MPIG6BO95866 241 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 MOSP00540 346 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 CD1BP29016 333 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 RPL23AP62750 156 aaKnown RBP9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 SLC35A2P78381 396 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 GPR50Q13585 617 aa9.37□□□□□ -0.91
TRAPPC6B-204ENST00000554018 GNMTQ14749 295 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms