RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SHISA6Q6ZSJ9 500 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 CLEC20AQ6ZU45 233 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 CFAP65Q6ZU64 1925 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 DENND4AQ7Z401 1863 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 LINC01551Q86U37 167 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ZNF429Q86V71 674 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 SLC35F6Q8N357 371 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ZDHHC22Q8N966 263 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR2M7Q8NG81 312 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR4K5Q8NGD3 323 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR2K2Q8NGT1 345 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR5H2Q8NGV7 314 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR1L1Q8NH94 360 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR5K1Q8NHB7 308 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 APOBEC3DQ96AK3 386 aaPredicted RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 CLDN23Q96B33 292 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 TAMM41Q96BW9 452 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 TMA16Q96EY4 203 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 IMMP1LQ96LU5 166 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 C18orf15Q96N68 181 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OLFM3Q96PB7 478 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR2A5Q96R48 311 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 SDHCQ99643 169 aaPredicted RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 PRRT1Q99946 306 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 MED18Q9BUE0 208 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 TMEM109Q9BVC6 243 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 PLA2G2FQ9BZM2 168 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 TRIM4Q9C037 500 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 EIF5A2Q9GZV4 153 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 ADGRL3Q9HAR2 1447 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ZNF532Q9HCE3 1301 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 HMG20AQ9NP66 347 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 DAZ3Q9NR90 486 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 CA10Q9NS85 328 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 TMEM216Q9P0N5 145 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 DOK5Q9P104 306 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OPTCQ9UBM4 332 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ZNF222Q9UK12 451 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 UTP11Q9Y3A2 253 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 YTHDF2Q9Y5A9 579 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 CACNG2Q9Y698 323 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 SNAPC4Q5SXM2 1469 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IGLV1-50A0A075B6I6 118 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IGHV3-49A0A0A0MS15 119 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IGKV6-21A0A0C4DH24 114 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IGHV5-10-1A0A0J9YXX1 117 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 GNG14A0A1W2PPG7 69 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 TMEM72A0PK05 275 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 MYBPHLA2RUH7 354 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 GOLGA6L4A6NEF3 574 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 UPK1AO00322 258 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 NOS1APO75052 506 aaPredicted RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 CIAO1O76071 339 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 APCSP02743 223 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 CRYBA1P05813 215 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 SNRPAP09012 282 aaKnown RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 FAM228BP0C875 321 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 OR12D1P0DN82 309 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IGHV1-8P0DP01 117 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 CTLA4P16410 223 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 PPP1CCP36873 323 aaKnown RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 MAP2K4P45985 399 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 RPS10P46783 165 aaKnown RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 PFN3P60673 137 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 PSME3P61289 254 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 HLA-DRB3P79483 266 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IFITM2Q01629 132 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 EMX1Q04741 257 aaPredicted RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 ATP5G2Q06055 141 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 KRR1Q13601 381 aaKnown RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 CDK10Q15131 360 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IL17AQ16552 155 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 LRRC26Q2I0M4 334 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 TMEM97Q5BJF2 176 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 CLLU1OSQ5K130 101 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 LAIR2Q6ISS4 152 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 SFXN4Q6P4A7 337 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 SLC16A13Q7RTY0 426 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 NEGR1Q7Z3B1 354 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 MARCH3Q86UD3 253 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 PCP2Q8IVA1 136 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 ORMDL3Q8N138 153 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 SLC25A45Q8N413 288 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 UBL4BQ8N7F7 174 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 SLC25A29Q8N8R3 303 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 ZIC4Q8N9L1 334 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 OR2D3Q8NGH3 330 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 OR9I1Q8NGQ6 314 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 OR1L8Q8NGR8 309 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 OR5W2Q8NH69 310 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 LINC01006Q8NI28 216 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 FAM57AQ8TBR7 257 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 SLC35B4Q969S0 331 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 CPNE2Q96FN4 548 aaPredicted RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 ANKRD36BP1Q96IX9 119 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 GPR82Q96P67 336 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 PPP1R2P1Q96PQ5 205 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 NRTNQ99748 197 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 GNB1LQ9BYB4 327 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 PCBD2Q9H0N5 130 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms