RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 KCNJ3P48549 501 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 TMEM236Q5W0B7 351 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF660Q6AZW8 331 aaPredicted RBP10.43□□□□□ -0.74
PRPF39-204ENST00000553605 TMEM179BQ7Z7N9 219 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 UBALD1Q8TB05 177 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 GIPC3Q8TF64 312 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 FGGYQ96C11 551 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 TEX12Q9BXU0 123 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 SLA2Q9H6Q3 261 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 CNOT2Q9NZN8 540 aaKnown RBP10.43□□□□□ -0.74
PRPF39-204ENST00000553605 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 LOC107986453A0A1B0GWG9 222 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 OR11H12B2RN74 326 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 CCDC22O60826 627 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 KRT8P05787 483 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 Q3ZCU0 254 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 ACTBL2Q562R1 376 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 CD200R1LQ6Q8B3 271 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 WFDC10AQ9H1F0 79 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 CLN6Q9NWW5 311 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 RNF150Q9ULK6 438 aa10.42□□□□□ -0.74
PRPF39-204ENST00000553605 ANKRD34BA5PLL1 514 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 HMGB1P1B2RPK0 211 aaPredicted RBP10.41□□□□□ -0.74
PRPF39-204ENST00000553605 LANCL1O43813 399 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 TRGV3P03979 118 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 TMEM225BP0DP42 221 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
PRPF39-204ENST00000553605 DBTP11182 482 aaKnown RBP10.41□□□□□ -0.74
PRPF39-204ENST00000553605 OSMP13725 252 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF20P17024 532 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 MECP2P51608 486 aaKnown RBP10.41□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF134P52741 427 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 CX3CL1P78423 397 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 PRR20EP86478 221 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 PRR20CP86479 221 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 PRR20DP86480 221 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 PRR20BP86481 221 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 PRR20AP86496 221 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 TNFRSF9Q07011 255 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 TATDN3Q17R31 274 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 CT45A1Q5HYN5 189 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 SSX6Q7RTT6 188 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 LAX1Q8IWV1 398 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 PRSS35Q8N3Z0 413 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 NPBQ8NG41 125 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 CT45A3Q8NHU0 189 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 ABHD5Q8WTS1 349 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 CMTM5Q96DZ9 223 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 ADGRL4Q9HBW9 690 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 TVP23BQ9NYZ1 205 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 SLC23A1Q9UHI7 598 aa10.41□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF785A8K8V0 405 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 NDUFA3O95167 84 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 NDUFB8O95169 186 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 UBCP0CG48 685 aaKnown RBP10.4□□□□□ -0.74
PRPF39-204ENST00000553605 AKIRIN2Q53H80 203 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 UNQ5815/PRO19632Q6UWF5 114 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 CYP2R1Q6VVX0 501 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 PPP1R27Q86WC6 154 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF439Q8NDP4 499 aa10.4□□□□□ -0.74
PRPF39-204ENST00000553605 UTP4Q969X6 686 aaKnown RBP10.4□□□□□ -0.74
PRPF39-204ENST00000553605 C13orf42A0A1B0GVH6 325 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 A0A1B0GVY2 172 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 METTL15A6NJ78 407 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 MAGEB3O15480 346 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 ORC5O43913 435 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 MT-ND2P03891 347 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 TFAP2AP05549 437 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 MOGAT2Q3SYC2 334 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 LCE2DQ5TA82 110 aaPredicted RBP10.39□□□□□ -0.75
PRPF39-204ENST00000553605 ELP2Q6IA86 826 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 LINC00336Q6ZUF6 198 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 LYG2Q86SG7 212 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 SUMF2Q8NBJ7 301 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 PHLDA1Q8WV24 401 aaPredicted RBP10.39□□□□□ -0.75
PRPF39-204ENST00000553605 CCDC107Q8WV48 283 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 TBX5Q99593 518 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 DPCDQ9BVM2 203 aaPredicted RBP10.39□□□□□ -0.75
PRPF39-204ENST00000553605 MAGIXQ9H6Y5 334 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 ADAM30Q9UKF2 790 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 DHDHQ9UQ10 334 aa10.39□□□□□ -0.75
PRPF39-204ENST00000553605 TMEM30CPA0ZSE6 113 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 FCN1O00602 326 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 DYRK1AQ13627 763 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 GK3PQ14409 553 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 IL13RA2Q14627 380 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 CD300EQ496F6 205 aaPredicted RBP10.38□□□□□ -0.75
PRPF39-204ENST00000553605 TMEM244Q5VVB8 128 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 BCDIN3DQ7Z5W3 292 aaKnown RBP10.38□□□□□ -0.75
PRPF39-204ENST00000553605 TCEANCQ8N8B7 351 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 LFNGQ8NES3 379 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 OR13C9Q8NGT0 318 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 RDH12Q96NR8 316 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 FAM103A1Q9BTL3 118 aaKnown RBP10.38□□□□□ -0.75
PRPF39-204ENST00000553605 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 ZNF556Q9HAH1 456 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 ZNF355PQ9NSJ1 428 aa10.38□□□□□ -0.75
PRPF39-204ENST00000553605 H2AFY2Q9P0M6 372 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms