RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 LSM2Q9Y333 95 aaKnown RBP9.38□□□□□ -0.91
SRP54-203ENST00000553544 STAB2Q8WWQ8 2551 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 OOSP1A8MZH6 123 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 J3QR06 171 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 TOR1AO14656 332 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 RAMP3O60896 148 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 LPLP06858 475 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 GZMHP20718 246 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 NFYBP25208 207 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 BRS3P32247 399 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 CEACAM3P40198 252 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 GP2P55259 537 aaKnown RBP9.37□□□□□ -0.91
SRP54-203ENST00000553544 TPBGQ13641 420 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 HSD17B12Q53GQ0 312 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 GLT8D1Q68CQ7 371 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 GLIPR1L1Q6UWM5 242 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 SLC16A12Q6ZSM3 486 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 JAGN1Q8N5M9 183 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 RFESDQ8TAC1 157 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 MRGPRDQ8TDS7 321 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 MUL1Q969V5 352 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 MGLLQ99685 303 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 UQCC2Q9BRT2 126 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 LIN7BQ9HAP6 207 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 RCC2Q9P258 522 aaKnown RBP9.37□□□□□ -0.91
SRP54-203ENST00000553544 GHRLQ9UBU3 117 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 PSG11Q9UQ72 335 aa9.37□□□□□ -0.91
SRP54-203ENST00000553544 MRPS28Q9Y2Q9 187 aaKnown RBP9.37□□□□□ -0.91
SRP54-203ENST00000553544 TRAV39A0A0B4J263 110 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A18PA6NE21 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A16PA6NEW6 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A20PA6NIJ5 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A9PA6NNJ1 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A12PA8MX19 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A5PA8MXJ8 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 C15orf65H3BRN8 121 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 SC5DO75845 299 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 MT-ND4P03905 459 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 MAS1P04201 325 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A15PP0C7V4 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A13PP0C7W8 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A14PP0C7W9 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A24PP0C7X0 464 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 UBBP0CG47 229 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 CD37P11049 281 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 CPEP16870 476 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 CD24P25063 80 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 SSTR5P35346 364 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 THBS3P49746 956 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 PSMD7P51665 324 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 INSL4Q14641 139 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 ABCA11PQ4W5N1 156 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 ACSM3Q53FZ2 586 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 CASC10Q5T4H9 136 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 LIPKQ5VXJ0 399 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 GAPTQ8N292 157 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 TMED9Q9BVK6 235 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 SPACA1Q9HBV2 294 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 ACOT13Q9NPJ3 140 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 LRRC42Q9Y546 428 aa9.36□□□□□ -0.91
SRP54-203ENST00000553544 TMEM30CPA0ZSE6 113 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A10PA6NDY2 464 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A7PA6NKC0 464 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 FAM90A23PA8MXZ1 464 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 ORC5O43913 435 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 AMY1AP04745 511 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 AMY2AP04746 511 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 MYCNOSP40205 109 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 ARHGDIBP52566 201 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 KCTD21Q4G0X4 260 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 ATAD3CQ5T2N8 411 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 AWAT2Q6E213 333 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 CCDC144NLQ6NUI1 221 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 C10orf99Q6UWK7 81 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 ZNF497Q6ZNH5 498 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 THNSL2Q86YJ6 484 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 TMEM104Q8NE00 496 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 OR52M1Q8NGK5 317 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 LEAP2Q969E1 77 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 RBM14Q96PK6 669 aaKnown RBP9.35□□□□□ -0.91
SRP54-203ENST00000553544 CST11Q9H112 138 aa9.35□□□□□ -0.91
SRP54-203ENST00000553544 LSM4Q9Y4Z0 139 aaKnown RBP9.35□□□□□ -0.91
SRP54-203ENST00000553544 A0A1W2PPI3 338 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 PSMB11A5LHX3 300 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 CCRL2O00421 344 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 OR2F2O95006 317 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 TNFAIP8O95379 198 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 IGHV3-7P01780 117 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 GLAP06280 429 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 MGMTP16455 207 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 GALP22466 123 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 SLC6A1P30531 599 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 MNDAP41218 407 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 RBM39Q14498 530 aaKnown RBP9.34□□□□□ -0.91
SRP54-203ENST00000553544 LTC4SQ16873 150 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 NKAPLQ5M9Q1 402 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 FAM27D1Q5T7N8 215 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 SIGIRRQ6IA17 410 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms