RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 DUX4L6P0CJ89 424 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DUX4L7P0CJ90 424 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 EDDM3AQ14507 147 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 PHLDA2Q53GA4 152 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DUX4L9Q6RFH8 374 aaPredicted RBP16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 ZNF788Q6ZQV5 615 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 KCTD9Q7L273 389 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 SGPP2Q8IWX5 399 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 MRGPRDQ8TDS7 321 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 RTN4IP1Q8WWV3 396 aaPredicted RBP16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 CCL17Q92583 94 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 ZNF486Q96H40 463 aaPredicted RBP16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 GAFA1Q96PS6 74 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 TMEM106BQ9NUM4 274 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DUX4Q9UBX2 424 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 SHPKQ9UHJ6 478 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 GYPAP02724 150 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 IGFBP2P18065 325 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 SNRPD2P62316 118 aaKnown RBP16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 ABCA11PQ4W5N1 156 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 OR1L1Q8NH94 360 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 ITGB1BP2Q9UKP3 347 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DSCAMO60469 2012 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 CCSO14618 274 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 IFNA2P01563 188 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 SRSF4Q08170 494 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 LPCAT3Q6P1A2 487 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 C1orf87Q8N0U7 546 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 SECTM1Q8WVN6 248 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 GALNT14Q96FL9 552 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 LURAP1Q96LR2 239 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 DCTN5Q9BTE1 182 aa16.29■□□□□ 0.2
RBFOX1-215ENST00000553186 TEX13DA0A0J9YY54 714 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 ODAMA1E959 279 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 LGALS8O00214 317 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 DNASE1P24855 282 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 CR1LQ2VPA4 569 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 C6orf183Q5T699 404 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 ZNF818PQ6ZRF7 136 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 ASB13Q8WXK3 278 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 GALMQ96C23 342 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 CCL13Q99616 98 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 ZNF665Q9H7R5 613 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 NAA60Q9H7X0 242 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 HRNRQ86YZ3 2850 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 HBZP02008 142 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 SSTR5P35346 364 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 P2RX3P56373 397 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 OR5D13Q8NGL4 314 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 COQ8AQ8NI60 647 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 SLC5A7Q9GZV3 580 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 BOLA1Q9Y3E2 137 aa16.28■□□□□ 0.2
RBFOX1-215ENST00000553186 KIAA2026Q5HYC2 2103 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 TRAV38-1A0A0B4J264 116 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 A0A1W2PPR1 153 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 C15orf65H3BRN8 121 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 LAMTOR1Q6IAA8 161 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 PARP12Q9H0J9 701 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 CCL28Q9NRJ3 127 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 RDH8Q9NYR8 311 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 LRBAP50851 2863 aa16.27■□□□□ 0.2
RBFOX1-215ENST00000553186 PPIAL4EA0A075B759 164 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 IGHV1-69-2A0A0G2JMI3 117 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 MEX3AA1L020 520 aaKnown RBP16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 PPIAL4DF5H284 164 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 SIGLEC5O15389 551 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 HSPA12AO43301 675 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 PPIAL4FP0DN26 164 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 CEACAM6P40199 344 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 PPOXP50336 477 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 ZNF843Q8N446 348 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 FAM216BQ8N7L0 139 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 ZNF565Q8N9K5 539 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 FAM234AQ9H0X4 552 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 NCOR1P1Q9H4R4 102 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 PLSCR3Q9NRY6 295 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 PPIAL4AQ9Y536 164 aa16.27■□□□□ 0.19
RBFOX1-215ENST00000553186 GPR31O00270 319 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 CD8AP01732 235 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 OR5AC1P0C628 307 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 IL2RGP31785 369 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 RND3P61587 244 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 FAM185AQ8N0U4 392 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 VRK1Q99986 396 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 TOLLIPQ9H0E2 274 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 RAB18Q9NP72 206 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 KCNIP3Q9Y2W7 256 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 TNFRSF13BO14836 293 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 MPPED1O15442 326 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 ADAP1O75689 374 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 EDDM3BP56851 147 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 TMEM187Q14656 261 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 SP6Q3SY56 376 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 C11orf71Q6IPW1 123 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 FAM53AQ6NSI3 398 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 TRAT1Q6PIZ9 186 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 CCDC71LQ8N9Z2 235 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 OR10V1Q8NGI7 309 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 ARL11Q969Q4 196 aa16.26■□□□□ 0.19
RBFOX1-215ENST00000553186 DNTTIP1Q9H147 329 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms