RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 OR8G1Q15617 311 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 IGFBP7Q16270 282 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF880Q6PDB4 577 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 PCSK4Q6UW60 755 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 LCN15Q6UWW0 184 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 GGNQ86UU5 652 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 HAPLN4Q86UW8 402 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 DMRTC2Q8IXT2 367 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-212ENST00000552491 Q8NFD4 153 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 CPT1CQ8TCG5 803 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 CA5BP1Q8WTZ4 195 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 DNASE2BQ8WZ79 361 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 GPR146Q96CH1 333 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 FAM210BQ96KR6 192 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 TECTBQ96PL2 329 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 ATP5SQ99766 215 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 FOXB1Q99853 325 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 PRO1933Q9H354 126 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 SMOC1Q9H4F8 434 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 PRDM6Q9NQX0 595 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 MTCH1Q9NZJ7 389 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 GTF3C1Q12789 2109 aa4.63□□□□□ -1.67
LIMA1-212ENST00000552491 DOCK10Q96BY6 2186 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 DNAJC13O75165 2243 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 USF3Q68DE3 2245 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 LOC102723996A0A087X1L8 192 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 A0A1B0GU03 582 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A10PA6NDY2 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A18PA6NE21 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A16PA6NEW6 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A20PA6NIJ5 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A8PA6NJQ4 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A7PA6NKC0 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 OR5H1A6NKK0 313 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A22PA8MWA6 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A12PA8MX19 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A5PA8MXJ8 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A23PA8MXZ1 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 DNPH1O43598 174 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 CXCL13O43927 109 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 PGLYRP1O75594 196 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 DFFBO76075 338 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 PTBP3O95758 552 aaKnown RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 IGKV1-39P01597 117 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 IGKV1D-39P04432 117 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 CYC1P08574 325 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 MMP7P09237 267 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A15PP0C7V4 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A13PP0C7W8 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A14PP0C7W9 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A24PP0C7X0 464 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 COX6A1P12074 109 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 RND2P52198 227 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 RAC3P60763 192 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 PNRC1Q12796 327 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 H1FOOQ8IZA3 346 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 TDHQ8IZJ6 230 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 OR56B2PQ8NGI1 322 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 M1APQ8TC57 530 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 IL22RA2Q969J5 263 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 SNX22Q96L94 193 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 CLDN34H7C241 214 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 KLF7O75840 302 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 IFNA5P01569 189 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 CTXN2P0C2S0 81 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 IAPPP10997 89 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 PSG2P11465 335 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 GPM6AP51674 278 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 FOXG1P55316 489 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 SSTP61278 116 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 RNPS1Q15287 305 aaKnown RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 BEND4Q6ZU67 534 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 AAED1Q7RTV5 226 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 STX12Q86Y82 276 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 C1orf87Q8N0U7 546 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 OR5D13Q8NGL4 314 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 OR51H1Q8NH63 302 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 ABHD3Q8WU67 409 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 SPSB4Q96A44 273 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF845Q96IR2 970 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 MEGF10Q96KG7 1140 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF488Q96MN9 340 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 HIST1H2BLQ99880 126 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 PRO3102Q9H379 93 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 GPR35Q9HC97 309 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 SDF2L1Q9HCN8 221 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 UFSP2Q9NUQ7 469 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 CISD1Q9NZ45 108 aaKnown RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 OR14J1Q9UGF5 321 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 CACNA1DQ01668 2161 aa4.62□□□□□ -1.67
LIMA1-212ENST00000552491 TNRC6AQ8NDV7 1962 aaKnown RBP4.62□□□□□ -1.67
LIMA1-212ENST00000552491 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 TRAV39A0A0B4J263 110 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF503-AS2A6NEH8 195 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ARGFXA6NJG6 315 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 GJE1A6NN92 205 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 H0Y980 276 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 SYNGR1O43759 233 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 CBR3O75828 277 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 CYB5R3P00387 301 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms