RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ZNHIT3Q15649 155 aaPredicted RBP3.53□□□□□ -1.84
HCFC2-204ENST00000550335 SSX1Q16384 188 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 KCTD16Q68DU8 428 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 LINC00596Q86U02 117 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 TMEM25Q86YD3 366 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 STK40Q8N2I9 435 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 LINC00337Q8N6G1 96 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 ACTL9Q8TC94 416 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 MRAP2Q96G30 205 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 ZNF514Q96K75 400 aaPredicted RBP3.53□□□□□ -1.84
HCFC2-204ENST00000550335 PITX2Q99697 317 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 ULBP1Q9BZM6 244 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 POMKQ9H5K3 350 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 ASB7Q9H672 318 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 PLEKHF2Q9H8W4 249 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 FBXL3Q9UKT7 428 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
HCFC2-204ENST00000550335 SZT2Q5T011 3432 aa3.53□□□□□ -1.84
HCFC2-204ENST00000550335 DNAH12Q6ZR08 3092 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 LOXHD1Q8IVV2 1947 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 RALGAPA2Q2PPJ7 1873 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 SIP14410 1827 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 KIR2DS1A0A191URI9 304 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 A0A1B0GX12 115 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 TMEM150BA6NC51 233 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF850A8MQ14 1090 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 CEACAM18A8MTB9 384 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 MKRN2OSH3BPM6 223 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 AQP9O43315 295 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 MPZL1O95297 269 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 PVALBP20472 110 aaPredicted RBP3.52□□□□□ -1.85
HCFC2-204ENST00000550335 GTF2H1P32780 548 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 UBE2G2P60604 165 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 HBG1P69891 147 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 HBG2P69892 147 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 ATP5G2Q06055 141 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 EBI3Q14213 229 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 ZBTB6Q15916 424 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 CLLU1OSQ5K130 101 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF880Q6PDB4 577 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 ZBTB8OSQ8IWT0 167 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 CD302Q8IX05 232 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF101Q8IZC7 436 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 RNF10Q8N5U6 811 aaKnown RBP3.52□□□□□ -1.85
HCFC2-204ENST00000550335 SLC26A10Q8NG04 563 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 FAM57AQ8TBR7 257 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 DDI1Q8WTU0 396 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 LINC01587Q99440 93 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 FBXL15Q9H469 300 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 ASCL3Q9NQ33 180 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 RWDD2AQ9UIY3 292 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 PTPRSQ13332 1948 aa3.52□□□□□ -1.85
HCFC2-204ENST00000550335 DYSFO75923 2080 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 IGLV4-60A0A075B6I1 120 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 IGKV2-28A0A075B6P5 120 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 C1orf232A0A0U1RR37 186 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 CLDN34H7C241 214 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 COX7A2P2O60397 106 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 ENTPD6O75354 484 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 WISP3O95389 354 aaPredicted RBP3.51□□□□□ -1.85
HCFC2-204ENST00000550335 IGKV2D-28P01615 120 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 LGALS7P47929 136 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 GCLMP48507 274 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 RHOAP61586 193 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 MEF2CQ06413 473 aaPredicted RBP3.51□□□□□ -1.85
HCFC2-204ENST00000550335 PRDX1Q06830 199 aaKnown RBP3.51□□□□□ -1.85
HCFC2-204ENST00000550335 BTN1A1Q13410 526 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 TTMPQ5BVD1 217 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 RBM48Q5RL73 367 aaKnown RBP3.51□□□□□ -1.85
HCFC2-204ENST00000550335 TRMT10CQ7L0Y3 403 aaKnown RBP3.51□□□□□ -1.85
HCFC2-204ENST00000550335 FA2HQ7L5A8 372 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 GALNT10Q86SR1 603 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 FUNDC1Q8IVP5 155 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 ZDHHC22Q8N966 263 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 LINC00301Q8NCQ3 95 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 TWIST2Q8WVJ9 160 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 DCUN1D5Q9BTE7 237 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 METTL8Q9H825 291 aaKnown RBP3.51□□□□□ -1.85
HCFC2-204ENST00000550335 RDH14Q9HBH5 336 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 SND1-IT1Q9HBX3 110 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 C1orf109Q9NX04 203 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 EURLQ9NYK6 297 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF835Q9Y2P0 537 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 GBF1Q92538 1859 aa3.51□□□□□ -1.85
HCFC2-204ENST00000550335 CDH23Q9H251 3354 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 VPS37CA5D8V6 355 aaPredicted RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 ARL5CA6NH57 179 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 I3L4J1 428 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 TRAPPC3O43617 180 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 MPZL2O60487 215 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 CXorf1O96002 111 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 IGKV3-11P04433 115 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 OCMP0CE72 109 aaPredicted RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 LIMS3P0CW19 117 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 LIMS4P0CW20 117 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 KCNE1P15382 129 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 SPNP16150 400 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 PRTN3P24158 256 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 PSMB6P28072 239 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms