RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 CD1AP06126 327 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 INSL4Q14641 139 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 CDH26Q8IXH8 852 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 PRR18Q8N4B5 295 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 LINC00311Q8N616 119 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 NKAIN3Q8N8D7 197 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 SGCDQ92629 289 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 TFAP2CQ92754 450 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 PHF21AQ96BD5 680 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 FKBP14Q9NWM8 211 aa12.95□□□□□ -0.34
VPS29-207ENST00000549970 SLC31A2O15432 143 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 SPINT2O43291 252 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 FGF16O43320 207 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 IGLL1P15814 213 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 IL3RAP26951 378 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 MAPK3P27361 379 aaPredicted RBP12.94□□□□□ -0.34
VPS29-207ENST00000549970 C6orf183Q5T699 404 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 REC114Q7Z4M0 266 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 OR10V1Q8NGI7 309 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 THRSPQ92748 146 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 FAM46BQ96A09 425 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 CYYR1Q96J86 154 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 Q96M66 194 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 NOL4LQ96MY1 436 aaPredicted RBP12.94□□□□□ -0.34
VPS29-207ENST00000549970 GNG12Q9UBI6 72 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 LINC00527Q9UJ94 153 aa12.94□□□□□ -0.34
VPS29-207ENST00000549970 UBE2QL1A1L167 161 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 FAM90A10PA6NDY2 464 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 FAM90A7PA6NKC0 464 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 SERPINE3A8MV23 424 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 FAM90A23PA8MXZ1 464 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 PTGES3LE9PB15 166 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 HBZP02008 142 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 CDK1P06493 297 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 GABPB1Q06547 395 aaPredicted RBP12.93□□□□□ -0.34
VPS29-207ENST00000549970 GPR50Q13585 617 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 FAM27D1Q5T7N8 215 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 Q6ZPA2 131 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 IZUMO1Q8IYV9 350 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 C8orf31Q8N9H6 132 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 WFDC9Q8NEX5 89 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 OR1L1Q8NH94 360 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 RTN4IP1Q8WWV3 396 aaPredicted RBP12.93□□□□□ -0.34
VPS29-207ENST00000549970 EAF1Q96JC9 268 aaPredicted RBP12.93□□□□□ -0.34
VPS29-207ENST00000549970 UQCC2Q9BRT2 126 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 MND1Q9BWT6 205 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 RAB9BQ9NP90 201 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
VPS29-207ENST00000549970 NCBP2LA6PVI3 153 aaKnown RBP12.92□□□□□ -0.34
VPS29-207ENST00000549970 MPIG6BO95866 241 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 RCC1P18754 421 aaPredicted RBP12.92□□□□□ -0.34
VPS29-207ENST00000549970 FUT3P21217 361 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 EBI3Q14213 229 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 Q3ZCU0 254 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 ACSM3Q53FZ2 586 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 SIGIRRQ6IA17 410 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 SLC35E3Q7Z769 313 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 OR2T10Q8NGZ9 312 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 MRAPQ8TCY5 172 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 CHPT1Q8WUD6 406 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 ST6GALNAC6Q969X2 333 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 TMED9Q9BVK6 235 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 CST11Q9H112 138 aa12.92□□□□□ -0.34
VPS29-207ENST00000549970 NKX1-2Q9UD57 310 aaPredicted RBP12.92□□□□□ -0.34
VPS29-207ENST00000549970 PDCD6O75340 191 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 CA11O75493 328 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 SC5DO75845 299 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 IGHG2P01859 326 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 ZNF134P52741 427 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 GP2P55259 537 aaKnown RBP12.91□□□□□ -0.34
VPS29-207ENST00000549970 SLC35A2P78381 396 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 MED22Q15528 200 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 NKAPLQ5M9Q1 402 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 RBM48Q5RL73 367 aaKnown RBP12.91□□□□□ -0.34
VPS29-207ENST00000549970 C6orf141Q5SZD1 244 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 TRAT1Q6PIZ9 186 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 SLC25A48Q6ZT89 311 aaKnown RBP12.91□□□□□ -0.34
VPS29-207ENST00000549970 TGIF2LXQ8IUE1 241 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 FOXRED2Q8IWF2 684 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 GAPTQ8N292 157 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 ZNF439Q8NDP4 499 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 RBMXL1Q96E39 390 aaKnown RBP12.91□□□□□ -0.34
VPS29-207ENST00000549970 DCLRE1BQ9H816 532 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 TAF9BQ9HBM6 251 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 AURKAIP1Q9NWT8 199 aaPredicted RBP12.91□□□□□ -0.34
VPS29-207ENST00000549970 GHRLQ9UBU3 117 aa12.91□□□□□ -0.34
VPS29-207ENST00000549970 LINC01548A6NM66 108 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 ZNF736B4DX44 427 aaPredicted RBP12.9□□□□□ -0.34
VPS29-207ENST00000549970 H0YHG0 523 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 GLAP06280 429 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 CD1BP29016 333 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 AQP4P55087 323 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 TMEM30BQ3MIR4 351 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 CT45A1Q5HYN5 189 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 RNLSQ5VYX0 342 aa12.9□□□□□ -0.34
VPS29-207ENST00000549970 OR10K2Q6IF99 312 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms