RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 CYB5R2Q6BCY4 276 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 LYZL2Q7Z4W2 148 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 CMTM1Q8IZ96 169 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 OR11L1Q8NGX0 322 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 DIRC2Q96SL1 478 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 TINAGQ9UJW2 476 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 ZDHHC8Q9ULC8 765 aa8.39□□□□□ -1.07
RAB5B-206ENST00000549505 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 NXPH2O95156 264 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 CCKARP32238 428 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 LUMP51884 338 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-206ENST00000549505 FBXL19-AS1Q494R0 122 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 C10orf91Q5T1B1 145 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 SLC35G3Q8N808 338 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 COQ2Q96H96 371 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 GINS3Q9BRX5 216 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 C15orf65H3BRN8 121 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 LGALS8O00214 317 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 ZNHIT1O43257 154 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 TIMM8AO60220 97 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-206ENST00000549505 PSPNO60542 156 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 JTBO76095 146 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 HOXB5P09067 269 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 NHLH1Q02575 133 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF565Q8N9K5 539 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 TOMM40LQ969M1 308 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 TP53TG5Q9Y2B4 290 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 RNF115Q9Y4L5 304 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 MMP24Q9Y5R2 645 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 ST8SIA3O43173 380 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 FSTL3O95633 263 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 S100GP29377 79 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 RPL12P30050 165 aaKnown RBP8.38□□□□□ -1.07
RAB5B-206ENST00000549505 ALKBH2Q6NS38 261 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 CXorf58Q96LI9 332 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
RAB5B-206ENST00000549505 PFDN2Q9UHV9 154 aa8.38□□□□□ -1.07
RAB5B-206ENST00000549505 RCL1Q9Y2P8 373 aaKnown RBP8.38□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF407Q9C0G0 2248 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 A0A0G2JNJ9 132 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 RCC1P18754 421 aaPredicted RBP8.37□□□□□ -1.07
RAB5B-206ENST00000549505 TAS2R30P59541 319 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 TEX36Q5VZQ5 186 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 RPRMLQ8N4K4 120 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 RNF141Q8WVD5 230 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 SDSLQ96GA7 329 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 MEGF10Q96KG7 1140 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 PARD6GQ9BYG4 376 aaPredicted RBP8.37□□□□□ -1.07
RAB5B-206ENST00000549505 CCL28Q9NRJ3 127 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 Q9UFV3 132 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 IL19Q9UHD0 177 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 NCOR1O75376 2440 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 FAM90A26D6RGX4 464 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 F2RL2O00254 374 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 HS3ST1O14792 307 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 PHF1O43189 567 aaPredicted RBP8.37□□□□□ -1.07
RAB5B-206ENST00000549505 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF44P15621 663 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 SULT1A2P50226 295 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 FXYD4P59646 89 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 BAXQ07812 192 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 SMCO1Q147U7 214 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 IGFBP7Q16270 282 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 PHLDA2Q53GA4 152 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 EIF5AL1Q6IS14 154 aaKnown RBP8.37□□□□□ -1.07
RAB5B-206ENST00000549505 RDH5Q92781 318 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 MUCL1Q96DR8 90 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 SNX22Q96L94 193 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 FAM234AQ9H0X4 552 aa8.37□□□□□ -1.07
RAB5B-206ENST00000549505 CHD3Q12873 2000 aaKnown RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 RNF212BA8MTL3 300 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 F5H0A9 414 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 PRRG2O14669 202 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 SPDEFO95238 335 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 CRYAAP02489 173 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 CD40P25942 277 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 KLF3P57682 345 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 MST1LQ2TV78 715 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 LRRC37A5PQ49AS3 106 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 IL34Q6ZMJ4 242 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 FAM219AQ8IW50 185 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 CD177Q8N6Q3 437 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF645Q8N7E2 425 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 CORO2AQ92828 525 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 LINC00052Q96N35 136 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 SCNM1Q9BWG6 230 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF471Q9BX82 626 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 PTAFRP25105 342 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 TMPRSS3P57727 454 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 PDLIM3Q53GG5 364 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 KDF1Q8NAX2 398 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 LYRM2Q9NU23 88 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 FREM2Q5SZK8 3169 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 FAM90A9PA6NNJ1 464 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 SWI5Q1ZZU3 235 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 SP6Q3SY56 376 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms