RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 EDN3P14138 238 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 LIFP15018 202 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 COL10A1Q03692 680 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 FOXO1Q12778 655 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 CLN3Q13286 438 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 KRTAP27-1Q3LI81 207 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 GPR146Q96CH1 333 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 OR14J1Q9UGF5 321 aa11.74□□□□□ -0.53
HDAC7-228ENST00000548938 ARGFXA6NJG6 315 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 PGLYRP1O75594 196 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-228ENST00000548938 SFTPCP11686 197 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 TLE1Q04724 770 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 ARL16Q0P5N6 197 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 GUSBP11Q6P575 273 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 Q6ZS49 121 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 NECAP1Q8NC96 275 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 OR51H1Q8NH63 302 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 SAP25Q8TEE9 199 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 PROK2Q9HC23 129 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 LY6G6EA0A0G2JKS1 128 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 KIAA1324LA8MWY0 1029 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-228ENST00000548938 LAMTOR5O43504 91 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 IAPPP10997 89 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 FGF7P21781 194 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 ADIRFQ15847 76 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 SSX2Q16385 188 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 HLA-BQ31612 363 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 TRIM61Q5EBN2 209 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 SCGB1C1Q8TD33 95 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 NEK7Q8TDX7 302 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 C2orf88Q9BSF0 95 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 OR2H1Q9GZK4 316 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 RBKSQ9H477 322 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 C19orf25Q9UFG5 118 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-228ENST00000548938 U3KQA8 63 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 CHD3Q12873 2000 aaKnown RBP11.73□□□□□ -0.53
HDAC7-228ENST00000548938 A8MWP6 167 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 DVL1O14640 695 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 METTL15P1P0C7V9 234 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 TUBG1P23258 451 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 PLA2G5P39877 138 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 Q6ZRM9 215 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 MBD3L1Q8WWY6 194 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 CRIM1Q9NZV1 1036 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 RARRES3Q9UL19 164 aa11.73□□□□□ -0.53
HDAC7-228ENST00000548938 F2RP25116 425 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 APLNRP35414 380 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 DSCR4P56555 118 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-228ENST00000548938 P2RY6Q15077 328 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 C16orf82Q7Z2V1 217 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 IL22RA2Q969J5 263 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-228ENST00000548938 SRD5A3Q9H8P0 318 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 VAX2Q9UIW0 290 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 ZNF391Q9UJN7 358 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 LAMP3Q9UQV4 416 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 ZNF407Q9C0G0 2248 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 KIAA1549Q9HCM3 1950 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 CNOT4O95628 575 aaKnown RBP11.72□□□□□ -0.53
HDAC7-228ENST00000548938 PSG2P11465 335 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 ELLP55199 621 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-228ENST00000548938 RNPS1Q15287 305 aaKnown RBP11.72□□□□□ -0.53
HDAC7-228ENST00000548938 USF2Q15853 346 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-228ENST00000548938 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 FOXB1Q99853 325 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 SMIM7Q9BQ49 75 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 CTDSP1Q9GZU7 261 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 PLK3Q9H4B4 646 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 PPP1R14DQ9NXH3 145 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 KIAA2026Q5HYC2 2103 aa11.72□□□□□ -0.53
HDAC7-228ENST00000548938 MAP1LC3B2A6NCE7 125 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 MDH2P40926 338 aaKnown RBP11.71□□□□□ -0.53
HDAC7-228ENST00000548938 ERVS71-1P61550 626 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 PCOLCEQ15113 449 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 CEACAM16Q2WEN9 425 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 NCR3LG1Q68D85 454 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 C1orf210Q8IVY1 113 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 RNASEH2CQ8TDP1 164 aaKnown RBP11.71□□□□□ -0.53
HDAC7-228ENST00000548938 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 P2RX4Q99571 388 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 MAP1LC3BQ9GZQ8 125 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
HDAC7-228ENST00000548938 BDP1A6H8Y1 2624 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 A0A1W2PQM1 296 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 XKRY2A2RUG3 117 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 IL18BPO95998 194 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 CFIP05156 583 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 PFN1P07737 140 aaKnown RBP11.71□□□□□ -0.54
HDAC7-228ENST00000548938 GZMHP20718 246 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 ABLIM2Q6H8Q1 611 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 MRGPRGQ86SM5 289 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 TGIF2LXQ8IUE1 241 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 CPT1CQ8TCG5 803 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms