RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	CX3CR1	P49238	355 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	SERPINB8	P50452	374 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	HNRNPA3	P51991	378 aa	Known RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	ARHGDIB	P52566	201 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	RIDA	P52758	137 aa	Known RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	PKNOX1	P55347	436 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	TNFAIP6	P98066	277 aa	Predicted RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	PAX2	Q02962	417 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	EGFEM1P	Q0D2K5	195 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	TIMM50	Q3ZCQ8	353 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	LINC00242	Q5T6M2	205 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	STUM	Q69YW2	141 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	C22orf42	Q6IC83	251 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	ARL9	Q6T311	187 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	C5orf46	Q6UWT4	87 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	ZNF730	Q6ZMV8	503 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	LRRC74B	Q6ZQY2	392 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	C3orf62	Q6ZUJ4	267 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	TMUB2	Q71RG4	321 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	SLC16A14	Q7RTX9	510 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	CMC1	Q7Z7K0	106 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	GVQW1	Q8N7I0	195 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	OR10H4	Q8NGA5	316 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	OR6N1	Q8NGY5	312 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	MFSD8	Q8NHS3	518 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	SFXN5	Q8TD22	340 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	STMN2	Q93045	179 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	MRGPRF	Q96AM1	343 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	RBMXL1	Q96E39	390 aa	Known RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	DNAJA3	Q96EY1	480 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	OPALIN	Q96PE5	141 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	CLCC1	Q96S66	551 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	CNN2	Q99439	309 aa	Known RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	SDF2	Q99470	211 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	MRPL57	Q9BQC6	102 aa	Known RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	CHID1	Q9BWS9	393 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	ULBP2	Q9BZM5	246 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	DPY30	Q9C005	99 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	PPA2	Q9H2U2	334 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	ARMC7	Q9H6L4	198 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	CACYBP	Q9HB71	228 aa	Known RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	ENPP5	Q9UJA9	477 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	PEX16	Q9Y5Y5	336 aa		2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	SOX21	Q9Y651	276 aa	Predicted RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	DYNC2H1	Q8NCM8	4307 aa	Known RBP	2.43	□□□□□ -2.02
RPAP3-205	ENST00000548211	DNAH9	Q9NYC9	4486 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	hCG_38984	A0A1B0GV85	526 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211		A0A1B0GVI7	797 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211		A0A1B0GW15	77 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211		A0A1W2PRD5	423 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	NKX6-3	A6NJ46	265 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	FAM159B	A6NKW6	160 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	TMEM114	B3SHH9	223 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211		E7ESA3	106 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	TOR1A	O14656	332 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	RGS16	O15492	202 aa	Predicted RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	NDUFA2	O43678	99 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	SULT1B1	O43704	296 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	AIRE	O43918	545 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	OR10H3	O60404	316 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	ZNF253	O75346	499 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	HSBP1	O75506	76 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	UGT2B17	O75795	530 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	TMEM50A	O95807	157 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	CA1	P00915	261 aa	Predicted RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	NQO1	P15559	274 aa	Known RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	ZNF32	P17041	273 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	ID1	P41134	155 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	KCNJ3	P48549	501 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	MRPL19	P49406	292 aa	Known RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	SRP9	P49458	86 aa	Known RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	GDI2	P50395	445 aa	Known RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	RPL27	P61353	136 aa	Known RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	GLO1	Q04760	184 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	RFTN2	Q52LD8	501 aa	Predicted RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	CYBRD1	Q53TN4	286 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	ZNF506	Q5JVG8	444 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	C1orf140	Q5VVS0	124 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	GPR107	Q5VW38	600 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	WDR25	Q64LD2	544 aa	Predicted RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	REEP3	Q6NUK4	255 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	ZNF600	Q6ZNG1	722 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211		Q6ZVQ6	151 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	TSEN54	Q7Z6J9	526 aa	Known RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	CALHM3	Q86XJ0	350 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	C20orf196	Q8IYI0	205 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	MTURN	Q8N3F0	131 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	C8orf31	Q8N9H6	132 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	OR2Z1	Q8NG97	314 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	OR51D1	Q8NGF3	324 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	OR52I1	Q8NGK6	324 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	GEMIN6	Q8WXD5	167 aa	Known RBP	2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	CACNG8	Q8WXS5	425 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	OR5P2	Q8WZ92	322 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	GTF2H4	Q92759	462 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	ISOC1	Q96CN7	298 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	CCDC126	Q96EE4	140 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	ZNF75A	Q96N20	296 aa		2.42	□□□□□ -2.02
RPAP3-205	ENST00000548211	TSPAN32	Q96QS1	320 aa		2.42	□□□□□ -2.02

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms