RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PTTG1IPP53801 180 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 ZXDAP98168 799 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 TEPPQ6URK8 271 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 AQP10Q96PS8 301 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 KHDC1LQ5JSQ8 128 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 DCAF12L2Q5VW00 463 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 CBLN2Q8IUK8 224 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 MARS2Q96GW9 593 aaKnown RBP10.89□□□□□ -0.67
COL4A6-209ENST00000545689 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
COL4A6-209ENST00000545689 ZNF638Q14966 1978 aaKnown RBP10.89□□□□□ -0.67
COL4A6-209ENST00000545689 ERVS71-1P61550 626 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 ZXDCQ2QGD7 858 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-209ENST00000545689 CA5BP1Q8WTZ4 195 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 IL22RA2Q969J5 263 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 SAP30LQ9HAJ7 183 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 MYO9BQ13459 2157 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM229AB2RXF0 380 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 NMBP08949 121 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 CRISP2P16562 243 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 STARD6P59095 220 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 OR52L2PQ8NGH6 319 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 LILRB1Q8NHL6 650 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-209ENST00000545689 FLYWCH2Q96CP2 140 aaKnown RBP10.88□□□□□ -0.67
COL4A6-209ENST00000545689 MS4A5Q9H3V2 200 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 C1RLQ9NZP8 487 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 RCC2Q9P258 522 aaKnown RBP10.88□□□□□ -0.67
COL4A6-209ENST00000545689 WIPI2Q9Y4P8 454 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 MED19A0JLT2 244 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-209ENST00000545689 ACP1P24666 158 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 BRS3P32247 399 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 G6PCP35575 357 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 C3AR1Q16581 482 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 DHRS7BQ6IAN0 325 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-209ENST00000545689 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 G6PC2Q9NQR9 355 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 MFSD2BA6NFX1 497 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 NPY1RP25929 384 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 FCER1GP30273 86 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 PRSS12P56730 875 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 LYZP61626 148 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 PSG5Q15238 335 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 OR1L8Q8NGR8 309 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 RND1Q92730 232 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 AMELYQ99218 206 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 NRIP2Q9BQI9 281 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 TRPM6Q9BX84 2022 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 LOC390937A0A1W2PQ73 354 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 FAM90A26D6RGX4 464 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 TMPRSS2O15393 492 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 PIN1P1O15428 100 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 P2RY6Q15077 328 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM97Q5BJF2 176 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 LINC01590Q5TEZ4 76 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
COL4A6-209ENST00000545689 USF1P22415 310 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-209ENST00000545689 TGIF2LYQ8IUE0 185 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 TGIF2LXQ8IUE1 241 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 OR1B1Q8NGR6 318 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 NPAS1Q99742 590 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 HDHD3Q9BSH5 251 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-209ENST00000545689 ZNF236Q9UL36 1845 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 ARG1P05089 322 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 RD3LP0DJH9 198 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 BCL2P10415 239 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 C10orf113Q5VZT2 155 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 ZNF660Q6AZW8 331 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-209ENST00000545689 OR4P4Q8NGL7 312 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 PRSS3P2Q8NHM4 247 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 PRDM14Q9GZV8 571 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 LHFPL6Q9Y693 200 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 MGST3O14880 152 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 HEXA-AS1Q9H8Q6 139 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 OR4A8P0C604 315 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 COX7A1P24310 79 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 AMTP48728 403 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 B2MP61769 119 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 HLA-DRB5Q30154 266 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 ZNF645Q8N7E2 425 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 MRPL30Q8TCC3 161 aaKnown RBP10.87□□□□□ -0.67
COL4A6-209ENST00000545689 POLR2AP24928 1970 aaKnown RBP10.87□□□□□ -0.67
COL4A6-209ENST00000545689 PTPRFP10586 1907 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 FAM90A27PA6NNH2 459 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 DNASE2BQ8WZ79 361 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 SMOC1Q9H4F8 434 aa10.87□□□□□ -0.67
COL4A6-209ENST00000545689 TRIP12Q14669 1992 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 J3QW42 95 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 AGFG2O95081 481 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 ORM2P19652 201 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 SRP14P37108 136 aaKnown RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 RIGQ13278 110 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 C10orf128Q5T292 105 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 C19orf48Q6RUI8 117 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 DYRK2Q92630 601 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 RAB29O14966 203 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 SRSF10O75494 262 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms