RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 Q6ZTK2 550 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 C16orf82Q7Z2V1 217 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 CDH26Q8IXH8 852 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 ABHD12Q8N2K0 398 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 OSR2Q8N2R0 312 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 STX19Q8N4C7 294 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 ZFP41Q8N8Y5 198 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 ZNF565Q8N9K5 539 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 OR10K1Q8NGX5 313 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 TRIM63Q969Q1 353 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 DERL3Q96Q80 235 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 NR1H4Q96RI1 486 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-223ENST00000545440 S100A13Q99584 98 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 DPCDQ9BVM2 203 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-223ENST00000545440 MND1Q9BWT6 205 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 BARHL1Q9BZE3 327 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 METTL9Q9H1A3 318 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 ZNF702PQ9H963 129 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 ZNF286AQ9HBT8 521 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 AKIP1Q9NQ31 210 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 PCDHB16Q9NRJ7 776 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 CALYQ9NYX4 217 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 DPM3Q9P2X0 92 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 KIF25Q9UIL4 384 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 FOXJ3Q9UPW0 622 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 ST3GAL6Q9Y274 331 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 ERGIC3Q9Y282 383 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 HILPDAQ9Y5L2 63 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 VWFP04275 2813 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 TRGV11A0A075B6L2 103 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 MEIKINA0A087WXM9 373 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 FAM172BPA6NC97 362 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 NPIPB11E5RHQ5 1161 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 ANKRD65E5RJM6 399 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 OR7C1O76099 320 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-223ENST00000545440 CDK1P06493 297 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 CGB3P0DN86 165 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 CGB7P0DN87 165 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 GTF2F2P13984 249 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 CELP19835 753 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 BRS3P32247 399 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 RAB13P51153 203 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 SLC22A6Q4U2R8 563 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 AWAT2Q6E213 333 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 CCDC144NLQ6NUI1 221 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 CCBE1Q6UXH8 406 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-223ENST00000545440 BAIAP2L2Q6UXY1 529 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 TMEM219Q86XT9 240 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 KLHDC1Q8N7A1 406 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 NANOGP1Q8N7R0 232 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 SUMF2Q8NBJ7 301 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 BPIFB6Q8NFQ5 453 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 OR10A7Q8NGE5 316 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 OR13A1Q8NGR1 328 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 OR9G1Q8NH87 305 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 PLPPR1Q8TBJ4 325 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 ORAI1Q96D31 301 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 MRPS24Q96EL2 167 aaKnown RBP6.15□□□□□ -1.42
SNHG1-223ENST00000545440 AKR1E2Q96JD6 320 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 NKX3-1Q99801 234 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-223ENST00000545440 MMP28Q9H239 520 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 SPACA1Q9HBV2 294 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 SIGLEC9Q9Y336 463 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 AMMECR1Q9Y4X0 333 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-223ENST00000545440 NOTCH1P46531 2555 aa6.15□□□□□ -1.42
SNHG1-223ENST00000545440 PNMA8CA0A1B0GUJ8 204 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 TMEM30CPA0ZSE6 113 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A10PA6NDY2 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A18PA6NE21 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A16PA6NEW6 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A20PA6NIJ5 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A7PA6NKC0 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A12PA8MX19 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A5PA8MXJ8 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A23PA8MXZ1 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 LY6LH3BQJ8 138 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 BUB1B-PAK6H3BSN5 160 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 TOR1AO14656 332 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 GEMIN2O14893 280 aaKnown RBP6.14□□□□□ -1.43
SNHG1-223ENST00000545440 RGS10O43665 173 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 CSF1P09603 554 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A15PP0C7V4 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A13PP0C7W8 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A14PP0C7W9 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A24PP0C7X0 464 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 NFYBP25208 207 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 SSTR5P35346 364 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 MNDAP41218 407 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 PRRX1P54821 245 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 AQP4P55087 323 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 TPTE2P1Q5T6R2 138 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 SLC16A12Q6ZSM3 486 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 LYPD6Q86Y78 171 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 SPARTQ8N0X7 666 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 JAGN1Q8N5M9 183 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 MRGPRDQ8TDS7 321 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 WIPF2Q8TF74 440 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-223ENST00000545440 MYDGFQ969H8 173 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 MUL1Q969V5 352 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 UQCC2Q9BRT2 126 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms