RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 J3QRE1 110 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 SDCBPO00560 298 aaPredicted RBP11.27□□□□□ -0.61
RTN3-214ENST00000545432 FAM107AO95990 144 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
RTN3-214ENST00000545432 PITPNAQ00169 270 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 NPBQ8NG41 125 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 OR10H4Q8NGA5 316 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 FLYWCH2Q96CP2 140 aaKnown RBP11.27□□□□□ -0.61
RTN3-214ENST00000545432 RITA1Q96K30 269 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 RHOVQ96L33 236 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 NR1H4Q96RI1 486 aaPredicted RBP11.27□□□□□ -0.61
RTN3-214ENST00000545432 ZNF581Q9P0T4 197 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 GNG8Q9UK08 70 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 NUBP2Q9Y5Y2 271 aa11.27□□□□□ -0.61
RTN3-214ENST00000545432 TMEM30CPA0ZSE6 113 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 SULT1B1O43704 296 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
RTN3-214ENST00000545432 NDUFA3O95167 84 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 MT-ND4P03905 459 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 OCM2P0CE71 109 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 OCMP0CE72 109 aaPredicted RBP11.26□□□□□ -0.61
RTN3-214ENST00000545432 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
RTN3-214ENST00000545432 CNTFRP26992 372 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
RTN3-214ENST00000545432 RAB40BQ12829 278 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 MMDQ15546 238 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 C5orf64Q2M2E5 130 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 TMEM30BQ3MIR4 351 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 KDM4DQ6B0I6 523 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 CD200R1LQ6Q8B3 271 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 FAM220AQ7Z4H9 259 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 SERPINA12Q8IW75 414 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 TCTEX1D1Q8N7M0 179 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 OR5D14Q8NGL3 314 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 FBXO7Q9Y3I1 522 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 RYR1P21817 5038 aa11.26□□□□□ -0.61
RTN3-214ENST00000545432 FKBP6O75344 327 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 DCTN3O75935 186 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
RTN3-214ENST00000545432 ACTBP60709 375 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 NDPQ00604 133 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 LIN54Q6MZP7 749 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 IL34Q6ZMJ4 242 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 ZNF497Q6ZNH5 498 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 GAPTQ8N292 157 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 OR13C3Q8NGS6 347 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 NSL1Q96IY1 281 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 ELOVL1Q9BW60 279 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 ANKRD60Q9BZ19 345 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 HIPK2Q9H2X6 1198 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 IL36GQ9NZH8 169 aa11.25□□□□□ -0.61
RTN3-214ENST00000545432 IGHV3-43A0A0B4J1X8 118 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 TCRBV3S1A0A5B6 114 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 GABRPO00591 440 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 NBR2O15453 112 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 T-ENOLP0DO92 83 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 IGHV3-43DP0DP04 118 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 ZSCAN26Q16670 478 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 ZNF660Q6AZW8 331 aaPredicted RBP11.24□□□□□ -0.61
RTN3-214ENST00000545432 HAPLN4Q86UW8 402 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 PELI1Q96FA3 418 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 FAM107BQ9H098 131 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 MED4Q9NPJ6 270 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 PARP11Q9NR21 331 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 KIAA1456Q9P272 454 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 FOXA2Q9Y261 457 aaPredicted RBP11.24□□□□□ -0.61
RTN3-214ENST00000545432 GMPPBQ9Y5P6 360 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 DNAH10Q8IVF4 4471 aa11.24□□□□□ -0.61
RTN3-214ENST00000545432 C12orf77C9JDV5 145 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 SLC16A6O15403 523 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 RPSAP08865 295 aaKnown RBP11.23□□□□□ -0.61
RTN3-214ENST00000545432 HTR1AP08908 422 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 ARSBP15848 533 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 MECP2P51608 486 aaKnown RBP11.23□□□□□ -0.61
RTN3-214ENST00000545432 PYHIN1Q6K0P9 492 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 LINC00596Q86U02 117 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 ODF3L1Q8IXM7 274 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 OR8J1Q8NGP2 316 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 TMEM106AQ96A25 262 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 CCDC124Q96CT7 223 aaKnown RBP11.23□□□□□ -0.61
RTN3-214ENST00000545432 NABP2Q9BQ15 211 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 CST11Q9H112 138 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 SIGLEC8Q9NYZ4 499 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 ST3GAL6Q9Y274 331 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
RTN3-214ENST00000545432 H0Y980 276 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 RGS11O94810 467 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 RBM11P57052 281 aaKnown RBP11.22□□□□□ -0.61
RTN3-214ENST00000545432 CX3CL1P78423 397 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 ALKBH1Q13686 389 aaKnown RBP11.22□□□□□ -0.61
RTN3-214ENST00000545432 KLF5Q13887 457 aaPredicted RBP11.22□□□□□ -0.61
RTN3-214ENST00000545432 AKIRIN2Q53H80 203 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 OR10K1Q8NGX5 313 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 UBALD1Q8TB05 177 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 TNFAIP8L1Q8WVP5 186 aa11.22□□□□□ -0.61
RTN3-214ENST00000545432 ZNF251Q9BRH9 671 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms