RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 GAPDHP04406 335 aaKnown RBP5.01□□□□□ -1.61
VPS50-220ENST00000544910 CD99P14209 185 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 POLR2GP62487 172 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS50-220ENST00000544910 IL24Q13007 206 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 HES3Q5TGS1 186 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 OR4A4PQ8NGN8 299 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 CLDN16Q9Y5I7 305 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 SCN2AQ99250 2005 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 GOLGA4Q13439 2230 aaKnown RBP5.01□□□□□ -1.61
VPS50-220ENST00000544910 SEC11BP0C7V7 166 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 RPS23P62266 143 aaKnown RBP5.01□□□□□ -1.61
VPS50-220ENST00000544910 PAFAH1B2P68402 229 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 ELOBQ15370 118 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 ZNF718Q3SXZ3 478 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 HIKESHIQ53FT3 197 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 LY6G6FQ5SQ64 297 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 TMEM45BQ96B21 275 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 MOB3AQ96BX8 217 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 LYZL4Q96KX0 146 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 RTBDNQ9BSG5 229 aaPredicted RBP5.01□□□□□ -1.61
VPS50-220ENST00000544910 PRDM14Q9GZV8 571 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 CXXC4Q9H2H0 198 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 CCL28Q9NRJ3 127 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 SEMA5BQ9P283 1151 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 CLEC18AA5D8T8 446 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 A6NDN8 102 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 A8MXK9 166 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 K7ESF4 209 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 LDLRAD4O15165 306 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 SOX15O60248 233 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 CDS2O95674 445 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 NGFP01138 241 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 PTGDSP41222 190 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 FGF12P61328 243 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 FAM3AP98173 230 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 IGFBP7Q16270 282 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 DEFB109BQ30KR1 87 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 DCAF10Q5QP82 559 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 TRAT1Q6PIZ9 186 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 DPPA3Q6W0C5 159 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 VASH2Q86V25 355 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 CLEC18CQ8NCF0 446 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 ADGRG7Q96K78 797 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 MANBALQ9NQG1 85 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 SLC7A10Q9NS82 523 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 C2orf16Q68DN1 1984 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 A0A0A6YYD4 124 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 ZIC3O60481 467 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 ARG1P05089 322 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 UMODP07911 640 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 PMELP40967 661 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 LPAR6P43657 344 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 SUB1P53999 127 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS50-220ENST00000544910 TAS2R60P59551 318 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 ERVFC1-1P60608 527 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 TMEM187Q14656 261 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 PRAMEF5Q5TYX0 476 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 PRAMEF6Q5VXH4 476 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 FAM166AQ6J272 317 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 SLC23A3Q6PIS1 610 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 DHRS13Q6UX07 377 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 C1QL2Q7Z5L3 287 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 CXorf67Q86X51 503 aaPredicted RBP5.01□□□□□ -1.61
VPS50-220ENST00000544910 SAXO1Q8IYX7 474 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 PAQR4Q8N4S7 273 aaPredicted RBP5.01□□□□□ -1.61
VPS50-220ENST00000544910 IL22RA2Q969J5 263 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 METTL1Q9UBP6 276 aaKnown RBP5.01□□□□□ -1.61
VPS50-220ENST00000544910 CACNG5Q9UF02 275 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 RPH3ALQ9UNE2 315 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 FANCMQ8IYD8 2048 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 DENND4AQ7Z401 1863 aa5.01□□□□□ -1.61
VPS50-220ENST00000544910 LOC102723996A0A087X1L8 192 aa5□□□□□ -1.61
VPS50-220ENST00000544910 H3BP45 60 aa5□□□□□ -1.61
VPS50-220ENST00000544910 M0R296 226 aa5□□□□□ -1.61
VPS50-220ENST00000544910 EIF3GO75821 320 aaKnown RBP eCLIP5□□□□□ -1.61
VPS50-220ENST00000544910 SP1P08047 785 aa5□□□□□ -1.61
VPS50-220ENST00000544910 HOXD4P09016 255 aaPredicted RBP5□□□□□ -1.61
VPS50-220ENST00000544910 MUC1P15941 1255 aaPredicted RBP5□□□□□ -1.61
VPS50-220ENST00000544910 FCER1GP30273 86 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SUCLG1P53597 346 aaKnown RBP5□□□□□ -1.61
VPS50-220ENST00000544910 PLGLAQ15195 96 aa5□□□□□ -1.61
VPS50-220ENST00000544910 BSXQ3C1V8 233 aa5□□□□□ -1.61
VPS50-220ENST00000544910 LRP11Q86VZ4 500 aa5□□□□□ -1.61
VPS50-220ENST00000544910 OR5AU1Q8NGC0 362 aa5□□□□□ -1.61
VPS50-220ENST00000544910 OR10S1Q8NGN2 331 aa5□□□□□ -1.61
VPS50-220ENST00000544910 OR2D2Q9H210 308 aa5□□□□□ -1.61
VPS50-220ENST00000544910 NAT8BQ9UHF3 227 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SSUH2Q9Y2M2 353 aa5□□□□□ -1.61
VPS50-220ENST00000544910 OR2W1Q9Y3N9 320 aa5□□□□□ -1.61
VPS50-220ENST00000544910 MED19A0JLT2 244 aaPredicted RBP5□□□□□ -1.61
VPS50-220ENST00000544910 RNF222A6NCQ9 220 aa5□□□□□ -1.61
VPS50-220ENST00000544910 TMEM210A6NLX4 147 aa5□□□□□ -1.61
VPS50-220ENST00000544910 CT45A10P0DMU9 189 aa5□□□□□ -1.61
VPS50-220ENST00000544910 CRISP2P16562 243 aa5□□□□□ -1.61
VPS50-220ENST00000544910 CASP6P55212 293 aa5□□□□□ -1.61
VPS50-220ENST00000544910 FAM3BP58499 235 aaPredicted RBP5□□□□□ -1.61
VPS50-220ENST00000544910 RPEL1Q2QD12 228 aa5□□□□□ -1.61
VPS50-220ENST00000544910 TMEM97Q5BJF2 176 aa5□□□□□ -1.61
VPS50-220ENST00000544910 ISOC2Q96AB3 205 aa5□□□□□ -1.61
VPS50-220ENST00000544910 NRIP2Q9BQI9 281 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms