RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585		A0A1B0GW55	424 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	TMEM120B	A0PK00	339 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585		H0YHG0	523 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	CDC42EP2	O14613	210 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	MTRF1	O75570	445 aa	Known RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	NXPH2	O95156	264 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	REN	P00797	406 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	APOC1	P02654	83 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4L2	P0CJ85	424 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4L3	P0CJ86	424 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4L4	P0CJ87	422 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4L5	P0CJ88	424 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4L6	P0CJ89	424 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4L7	P0CJ90	424 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	TROVE2	P10155	538 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	CFL1	P23528	166 aa	Known RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	OTX1	P32242	354 aa	Predicted RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	GABRA2	P47869	451 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	THBS3	P49746	956 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	RAB13	P51153	203 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DYNLT3	P51808	116 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	SLC7A2	P52569	658 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	SLC25A1	P53007	311 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	NANOS2	P60321	138 aa	Known RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	MAGOH	P61326	146 aa	Known RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	IL5RA	Q01344	420 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	ARL16	Q0P5N6	197 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	RIG	Q13278	110 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DGUOK	Q16854	277 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	SNAI3	Q3KNW1	292 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	CYBRD1	Q53TN4	286 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	FAM76B	Q5HYJ3	339 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	GLYATL3	Q5SZD4	288 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	STUM	Q69YW2	141 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	TBPL2	Q6SJ96	375 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	CCDC121	Q6ZUS5	278 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	MKX	Q8IYA7	352 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	OFCC1	Q8IZS5	231 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	FTMT	Q8N4E7	242 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	SLC26A10	Q8NG04	563 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR4X2	Q8NGF9	303 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR8J3	Q8NGG0	315 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR56B2P	Q8NGI1	322 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR6F1	Q8NGZ6	308 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR2AE1	Q8NHA4	323 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNF671	Q8TAW3	534 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	ITFG2	Q969R8	447 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	SEH1L	Q96EE3	360 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	TPD52L3	Q96J77	140 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	AKR1E2	Q96JD6	320 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	FAM218A	Q96MZ4	157 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	NSRP1	Q9H0G5	558 aa	Known RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	TLNRD1	Q9H1K6	362 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	PLEKHA3	Q9HB20	300 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	ABCB9	Q9NP78	766 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	USE1	Q9NZ43	259 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	ADA2	Q9NZK5	511 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	DUX4	Q9UBX2	424 aa		4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	TBL2	Q9Y4P3	447 aa	Known RBP	4.76	□□□□□ -1.65
CPSF7-222	ENST00000544585	LCE6A	A0A183	80 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	TMEM210	A6NLX4	147 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR2AT4	A6NND4	320 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	DCTN6	O00399	190 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	ARPC3	O15145	178 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	IDH3B	O43837	385 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	CALB2	P22676	271 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	SLC6A1	P30531	599 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	MYCNOS	P40205	109 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	ID1	P41134	155 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	YAP1	P46937	504 aa	Known RBP	4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	GTF2A1	P52655	376 aa	Predicted RBP	4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR12D2	P58182	307 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	ELF3	P78545	371 aa	Predicted RBP	4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	SSX2	Q16385	188 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	DMRTC1	Q5HYR2	192 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	TCTEX1D4	Q5JR98	221 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	FFAR4	Q5NUL3	377 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	DMKN	Q6E0U4	476 aa	Predicted RBP	4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	CYP4Z1	Q86W10	505 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	C11orf42	Q8N5U0	333 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR52H1	Q8NGJ2	320 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR13D1	Q8NGV5	346 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR2T27	Q8NH04	317 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	CAPSL	Q8WWF8	208 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	MYDGF	Q969H8	173 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	SGK3	Q96BR1	496 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	FAM210A	Q96ND0	272 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	ERMAP	Q96PL5	475 aa	Predicted RBP	4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	GAFA1	Q96PS6	74 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	EBF4	Q9BQW3	602 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	RTL8A	Q9BWD3	113 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	KRTAP9-9	Q9BYP9	154 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	WDR13	Q9H1Z4	485 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	RASL12	Q9NYN1	266 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	MPC1	Q9Y5U8	109 aa		4.75	□□□□□ -1.65
CPSF7-222	ENST00000544585	TENM2	Q9NT68	2774 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585		A0A087WW49	117 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	C17orf98	A8MV24	154 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms