RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	TAGLN2	P37802	199 aa	Known RBP	12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	PSG4	Q00888	419 aa		12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	FAM27B	Q5VT28	67 aa		12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	ABLIM2	Q6H8Q1	611 aa		12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	ZNF343	Q6P1L6	599 aa		12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	SLC25A31	Q9H0C2	315 aa		12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	CRIM1	Q9NZV1	1036 aa		12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	AK3	Q9UIJ7	227 aa		12.88	□□□□□ -0.35
CHFR-223	ENST00000544268	GEMIN2	O14893	280 aa	Known RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	EREG	O14944	169 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	ZNF133	P52736	654 aa	Predicted RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	FOXG1	P55316	489 aa	Predicted RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	ZNF92	Q03936	586 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	C3AR1	Q16581	482 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	CEACAM16	Q2WEN9	425 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268		Q6ZPA2	131 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	SLC16A14	Q7RTX9	510 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	ABHD5	Q8WTS1	349 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	RAB39B	Q96DA2	213 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268		Q96M66	194 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	SCGB3A2	Q96PL1	93 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	ANKRD11	Q6UB99	2663 aa	Predicted RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268		H3BQ15	152 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	CYB5B	O43169	146 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	ERVFRD-1	P60508	538 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	MRPS34	P82930	218 aa	Known RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	HIKESHI	Q53FT3	197 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	PP6455	Q8WZ26	134 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	EMG1	Q92979	244 aa	Known RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	TOMM40L	Q969M1	308 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	SPTSSA	Q969W0	71 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	SMIM3	Q9BZL3	60 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	TMEM38B	Q9NVV0	291 aa		12.87	□□□□□ -0.35
CHFR-223	ENST00000544268	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	DLEU1	O43261	78 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	GZMB	P10144	247 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	AAED1	Q7RTV5	226 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	OR1F12	Q8NHA8	337 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	TM2D1	Q9BX74	207 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	ZDHHC11	Q9H8X9	412 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	ATM	Q13315	3056 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	TRAV17	A0A0B4J275	112 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	HSBP1L1	C9JCN9	74 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	ALDH3B1	P43353	468 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	FHIT	P49789	147 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	FXYD4	P59646	89 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	UBE2K	P61086	200 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	FRZB	Q92765	325 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	GINS3	Q9BRX5	216 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268	OR14J1	Q9UGF5	321 aa		12.86	□□□□□ -0.35
CHFR-223	ENST00000544268		A0A096LPE4	126 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	BORCS7-ASMT	A0A0B4J1R7	106 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268		A0A1W2PPZ6	126 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	TGOLN2	O43493	480 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	DIRAS3	O95661	229 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	CD200	P41217	278 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	GPR137C	Q8N3F9	429 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	HS3ST6	Q96QI5	342 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	PLEKHA2	Q9HB19	425 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	SPRR3	Q9UBC9	169 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	URGCP-MRPS24	S4R325	110 aa		12.85	□□□□□ -0.35
CHFR-223	ENST00000544268	TRGV5	A0A0B4J1U4	118 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	DEDD	O75618	318 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	PRH1	P02810	166 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	NPS	P0C0P6	89 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	RBX1	P62877	108 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	GAGE1	Q13065	139 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	ETFRF1	Q6IPR1	90 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	FNDC9	Q8TBE3	224 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	MRPL24	Q96A35	216 aa	Known RBP	12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	PITPNC1	Q9UKF7	332 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	SERPINE3	A8MV23	424 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	WISP2	O76076	250 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	CCNO	P22674	350 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	GLIPR1	P48060	266 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	TAS2R46	P59540	309 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	DAZAP2	Q15038	168 aa	Predicted RBP	12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	RAB35	Q15286	201 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	IGFBP7	Q16270	282 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	SLC25A24	Q6NUK1	477 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	CALHM1	Q8IU99	346 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	FBXL14	Q8N1E6	418 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	HSD17B11	Q8NBQ5	300 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	RCC1L	Q96I51	464 aa	Known RBP	12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	GPHA2	Q96T91	129 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	FOXB1	Q99853	325 aa		12.84	□□□□□ -0.35
CHFR-223	ENST00000544268	ZNF503-AS2	A6NEH8	195 aa		12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	NPBWR2	P48146	333 aa		12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	PHLDA2	Q53GA4	152 aa		12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	OR11L1	Q8NGX0	322 aa		12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	PIGC	Q92535	297 aa		12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	RARRES2	Q99969	163 aa		12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	SNHG12	Q9BXW3	62 aa		12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.83	□□□□□ -0.35
CHFR-223	ENST00000544268	CACNA1G	O43497	2377 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	OR6C6	A6NF89	314 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	ITGB1BP1	O14713	200 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	HSD17B6	O14756	317 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms