RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SDSLQ96GA7 329 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 MS4A5Q9H3V2 200 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 SAP30LQ9HAJ7 183 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 DYNLRB1Q9NP97 96 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 DCAF16Q9NXF7 216 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 MAB21L2Q9Y586 359 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 ANKHD1Q8IWZ3 2542 aaKnown RBP16.56■□□□□ 0.24
COPS7A-218ENST00000543939 TRAV14DV4A0A0A6YYC5 116 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 C5orf51A6NDU8 294 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 MPPED1O15442 326 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 OR5AC1P0C628 307 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 ZNF672Q499Z4 452 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-218ENST00000543939 C6orf183Q5T699 404 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 ZNF818PQ6ZRF7 136 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 TPRX1Q8N7U7 411 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 OR13A1Q8NGR1 328 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 OR1L1Q8NH94 360 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 MRGPRDQ8TDS7 321 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 LURAP1Q96LR2 239 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 SUCNR1Q9BXA5 334 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 PKDREJQ9NTG1 2253 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 C13orf42A0A1B0GVH6 325 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 HMSDA8MTL9 139 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 RGS13O14921 159 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 CLDN14O95500 239 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 MUC1P15941 1255 aaPredicted RBP16.55■□□□□ 0.24
COPS7A-218ENST00000543939 SP6Q3SY56 376 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 ZNF561Q8N587 486 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 ZNRF1Q8ND25 227 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 ITLN2Q8WWU7 325 aaPredicted RBP16.55■□□□□ 0.24
COPS7A-218ENST00000543939 GALMQ96C23 342 aa16.55■□□□□ 0.24
COPS7A-218ENST00000543939 LRRC30A6NM36 301 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 HSPA12AO43301 675 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 ZG16O60844 167 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 HBZP02008 142 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 AGAP20933 346 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 FGL1Q08830 312 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 EDDM3AQ14507 147 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 SWI5Q1ZZU3 235 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 OR10V1Q8NGI7 309 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 GON7Q9BXV9 100 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 NMES1Q9C002 83 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 SLA2Q9H6Q3 261 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 RDH8Q9NYR8 311 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 DSCAML1Q8TD84 2053 aa16.54■□□□□ 0.24
COPS7A-218ENST00000543939 HSD17B6O14756 317 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 CYCSP99999 105 aaKnown RBP16.53■□□□□ 0.24
COPS7A-218ENST00000543939 TRAT1Q6PIZ9 186 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 LRTM2Q8N967 370 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 GLYATL2Q8WU03 294 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 PPP1R1CQ8WVI7 109 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 MSI2Q96DH6 328 aaKnown RBP16.53■□□□□ 0.24
COPS7A-218ENST00000543939 GAFA1Q96PS6 74 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 TOLLIPQ9H0E2 274 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 METTL8Q9H825 291 aaKnown RBP16.53■□□□□ 0.24
COPS7A-218ENST00000543939 COMMD9Q9P000 198 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 ODAMA1E959 279 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 MPTX1A8MV57 137 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 SNAPC5O75971 98 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 HOXB5P09067 269 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 CXCL2P19875 107 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 IL2RGP31785 369 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 CEACAM6P40199 344 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 LUMP51884 338 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-218ENST00000543939 CR1LQ2VPA4 569 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 ZNF788Q6ZQV5 615 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 LIAT1Q6ZQX7 453 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 TBC1D26Q86UD7 250 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 BVESQ8NE79 360 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 DEFB108BQ8NET1 73 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 OR5D13Q8NGL4 314 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 OR10C1Q96KK4 312 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 TP53RKQ96S44 253 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 VRK1Q99986 396 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-218ENST00000543939 DCTN5Q9BTE1 182 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 DNTTIP1Q9H147 329 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 NCOR1P1Q9H4R4 102 aa16.53■□□□□ 0.24
COPS7A-218ENST00000543939 FXYD6-FXYD2A0A087WZ82 144 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 C3orf85A0A1B0GTC6 90 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 C15orf65H3BRN8 121 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 TMEM178BH3BS89 294 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 PHF1O43189 567 aaPredicted RBP16.52■□□□□ 0.24
COPS7A-218ENST00000543939 SELLP14151 372 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 P2RX3P56373 397 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 CMTM1Q8IZ96 169 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 MUC15Q8N387 334 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 PARP12Q9H0J9 701 aaKnown RBP16.52■□□□□ 0.24
COPS7A-218ENST00000543939 ZNF665Q9H7R5 613 aa16.52■□□□□ 0.24
COPS7A-218ENST00000543939 PAIP2BQ9ULR5 123 aaKnown RBP16.52■□□□□ 0.24
COPS7A-218ENST00000543939 A0A1B0GW55 424 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 LGALS8O00214 317 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 GYPAP02724 150 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4L2P0CJ85 424 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4L3P0CJ86 424 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4L4P0CJ87 422 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4L5P0CJ88 424 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4L6P0CJ89 424 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4L7P0CJ90 424 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 SLC25A4P12235 298 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms