RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 Q6ZRG5 221 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 SVBPQ8N300 66 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 IL1F10Q8WWZ1 152 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 ABHD14BQ96IU4 210 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 FAM212BQ9NTI7 297 aaPredicted RBP11.78□□□□□ -0.52
MSH2-206ENST00000543555 OR1A1Q9P1Q5 309 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 ERRFI1Q9UJM3 462 aaPredicted RBP11.78□□□□□ -0.52
MSH2-206ENST00000543555 CARHSP1Q9Y2V2 147 aaKnown RBP11.78□□□□□ -0.52
MSH2-206ENST00000543555 ESPL1Q14674 2120 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 IGHV3-64DA0A0J9YX35 117 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 TMEM210A6NLX4 147 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 H0YL77 283 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 GRPP07492 148 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 MUC1P15941 1255 aaPredicted RBP11.78□□□□□ -0.52
MSH2-206ENST00000543555 ATF4P18848 351 aaPredicted RBP11.78□□□□□ -0.52
MSH2-206ENST00000543555 F2RP25116 425 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 S100GP29377 79 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 F2RL1P55085 397 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 ACSF3Q4G176 576 aaPredicted RBP11.78□□□□□ -0.52
MSH2-206ENST00000543555 OR2C3Q8N628 320 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 TRAV39A0A0B4J263 110 aa11.77□□□□□ -0.52
MSH2-206ENST00000543555 PVALBP20472 110 aaPredicted RBP11.77□□□□□ -0.52
MSH2-206ENST00000543555 FOXF2Q12947 444 aa11.77□□□□□ -0.52
MSH2-206ENST00000543555 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.52
MSH2-206ENST00000543555 PUSL1Q8N0Z8 303 aaKnown RBP11.77□□□□□ -0.52
MSH2-206ENST00000543555 OR10V1Q8NGI7 309 aa11.77□□□□□ -0.52
MSH2-206ENST00000543555 RAXQ9Y2V3 346 aa11.77□□□□□ -0.52
MSH2-206ENST00000543555 FAM96BQ9Y3D0 163 aa11.77□□□□□ -0.52
MSH2-206ENST00000543555 FAM74A7A6NL05 159 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 CEACAM4O75871 244 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 SPP1P10451 314 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 FAM74A3Q4VXF1 159 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
MSH2-206ENST00000543555 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 OBP2BQ9NPH6 170 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 TINAGQ9UJW2 476 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 ITPR1Q14643 2758 aa11.77□□□□□ -0.53
MSH2-206ENST00000543555 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 C1QTNF9BB2RNN3 333 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 K7EM74 188 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 SH2D1BO14796 132 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 C1QTNF9P0C862 333 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 FAM122AQ96E09 287 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 TLNRD1Q9H1K6 362 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 PLSCR4Q9NRQ2 329 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 ZNF891A8MT65 544 aaPredicted RBP11.76□□□□□ -0.53
MSH2-206ENST00000543555 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
MSH2-206ENST00000543555 MLNRO43193 412 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 SSSCA1O60232 199 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 WDR1O75083 606 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 ACAA1P09110 424 aaPredicted RBP11.76□□□□□ -0.53
MSH2-206ENST00000543555 ZNF169Q14929 603 aaPredicted RBP11.76□□□□□ -0.53
MSH2-206ENST00000543555 PRR18Q8N4B5 295 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 OR8G5Q8NG78 346 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 TAAR6Q96RI8 345 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 SEC11CQ9BY50 192 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 MAGT1Q9H0U3 335 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 MBNL3Q9NUK0 354 aaKnown RBP11.76□□□□□ -0.53
MSH2-206ENST00000543555 PURGQ9UJV8 347 aaKnown RBP11.76□□□□□ -0.53
MSH2-206ENST00000543555 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 AHRRA9YTQ3 701 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 DANCRP0C864 163 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 ID3Q02535 119 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 TESK1Q15569 626 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 OR51H1Q8NH63 302 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 HES4Q9HCC6 221 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 TAAR3PQ9P1P4 343 aa11.76□□□□□ -0.53
MSH2-206ENST00000543555 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.75□□□□□ -0.53
MSH2-206ENST00000543555 RNASEK-C17orf49H0YIS7 233 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 AGPAT2O15120 278 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 WNT2P09544 360 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 SPACA3Q8IXA5 215 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 COL12A1Q99715 3063 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 PARP12Q9H0J9 701 aaKnown RBP11.75□□□□□ -0.53
MSH2-206ENST00000543555 PLEKHF2Q9H8W4 249 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 LYRM2Q9NU23 88 aaPredicted RBP11.75□□□□□ -0.53
MSH2-206ENST00000543555 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 HAND1O96004 215 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 IGLV2-14P01704 120 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 OR8U9P0C7N5 309 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 CECR9P0C854 216 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 ASCL1P50553 236 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 VAMP2P63027 116 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
MSH2-206ENST00000543555 CXorf67Q86X51 503 aaPredicted RBP11.75□□□□□ -0.53
MSH2-206ENST00000543555 OR8U1Q8NH10 309 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 SH3BGRL3Q9H299 93 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 MSRB2Q9Y3D2 182 aa11.75□□□□□ -0.53
MSH2-206ENST00000543555 PIGBOS1A0A0B4J2F0 54 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 TNFSF13O75888 250 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 CD5P06127 495 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 PSG2P11465 335 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 HMGN3Q15651 99 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 TMEM252Q8N6L7 170 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 ZNF610Q8N9Z0 462 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms