RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PEX16Q9Y5Y5 336 aa10.41□□□□□ -0.74
TNFRSF1A-215ENST00000543359 MCRIP1C9JLW8 97 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 H0YHG0 523 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 M0QZK8 103 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 SLC31A2O15432 143 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 GLAP06280 429 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 RCC1P18754 421 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 FUT3P21217 361 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 MYF6P23409 242 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 MAPK3P27361 379 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 QRFPP83859 136 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 SPHARQ15513 63 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 Q3ZCU0 254 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 C1orf100Q5SVJ3 147 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 TMEM91Q6ZNR0 172 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 C5orf24Q7Z6I8 188 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 Q8N6K4 173 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 OR10X1Q8NGY0 326 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 OR1L1Q8NH94 360 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 PHYHIPQ92561 330 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 THRSPQ92748 146 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 MYDGFQ969H8 173 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 ETAA1Q9NY74 926 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 GHRLQ9UBU3 117 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 MOB4Q9Y3A3 225 aa10.4□□□□□ -0.74
TNFRSF1A-215ENST00000543359 COL7A1Q02388 2944 aa10.4□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IGHV3-43A0A0B4J1X8 118 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IGHV1-3A0A0C4DH29 117 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 AIPO00170 330 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 SDCBPO00560 298 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HSD17B6O14756 317 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 PEX14O75381 377 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CRTAPO75718 401 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 UCHL1P09936 223 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IGHV3-43DP0DP04 118 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 VSIG8P0DPA2 414 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 SRMP19623 302 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ZNF137PP52743 207 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 GABPB1Q06547 395 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TPBGQ13641 420 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ARSJQ5FYB0 599 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR10K2Q6IF99 312 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CENPVQ7Z7K6 275 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 C5orf56Q8N8D9 126 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR4K15Q8NH41 348 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 NEK7Q8TDX7 302 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 FAM46BQ96A09 425 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 R3HDM4Q96D70 268 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 GFI1Q99684 422 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TMED9Q9BVK6 235 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ANKRD60Q9BZ19 345 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 PLSCR3Q9NRY6 295 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MBNL3Q9NUK0 354 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 SCN3BQ9NY72 215 aa10.39□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CCRL2O00421 344 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 SLC22A1O15245 554 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 FGF16O43320 207 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 PDCD6O75340 191 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CA11O75493 328 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IGKV1D-33P01593 117 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IGKV1-33P01594 117 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HBZP02008 142 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 GAPDHP04406 335 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 REG1BP48304 166 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 UNC119Q13432 240 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HNF4GQ14541 408 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MED22Q15528 200 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CT45A1Q5HYN5 189 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 LIPKQ5VXJ0 399 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 SLC25A48Q6ZT89 311 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CEACAM19Q7Z692 300 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IZUMO1Q8IYV9 350 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR4F17Q8NGA8 305 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CT45A3Q8NHU0 189 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MRPL30Q8TCC3 161 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 RTN4IP1Q8WWV3 396 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 EAF1Q96JC9 268 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR4F4Q96R69 305 aa10.38□□□□□ -0.75
TNFRSF1A-215ENST00000543359 A0A0A6YYD4 124 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 UBE2QL1A1L167 161 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 LINC01548A6NM66 108 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ZNF736B4DX44 427 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 SPINT2O43291 252 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MPIG6BO95866 241 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 UBBP0CG47 229 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TMEM11P17152 192 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CRHBPP24387 322 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CHATP28329 748 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 RPS27AP62979 156 aaKnown RBP10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 C6orf183Q5T699 404 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 STEAP3Q658P3 488 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 GLT8D1Q68CQ7 371 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 Q6ZPA2 131 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 RBMXL1Q96E39 390 aaKnown RBP10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 SULT4A1Q9BR01 284 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 KCNK15Q9H427 330 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TAF9BQ9HBM6 251 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ISYNA1Q9NPH2 558 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms