RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 THOC7Q6I9Y2 204 aaKnown RBP11.89□□□□□ -0.51
LDB3-207ENST00000542786 MRGPRGQ86SM5 289 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 CD177Q8N6Q3 437 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 OR2Z1Q8NG97 314 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 OR10Z1Q8NGY1 313 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 LRRC29Q8WV35 223 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 MUCL1Q96DR8 90 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 TOLLIPQ9H0E2 274 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 PLEKHA2Q9HB19 425 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 NSG2Q9Y328 171 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 CHD3Q12873 2000 aaKnown RBP11.89□□□□□ -0.51
LDB3-207ENST00000542786 ARID1AO14497 2285 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 SRRM5B3KS81 715 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 C12orf77C9JDV5 145 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 TEX46H3BTG2 121 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 TAAR5O14804 337 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 ZNF737O75373 536 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 CRYAAP02489 173 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 GAPDHP04406 335 aaKnown RBP11.89□□□□□ -0.51
LDB3-207ENST00000542786 BMP5P22003 454 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 MZT1Q08AG7 82 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 SMCO1Q147U7 214 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
LDB3-207ENST00000542786 CMTM1Q8IZ96 169 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 IL1F10Q8WWZ1 152 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 FBXL17Q9UF56 701 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
LDB3-207ENST00000542786 CADP27708 2225 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 PRRG2O14669 202 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 SCGB1D2O95969 90 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
LDB3-207ENST00000542786 COL10A1Q03692 680 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 OR1L1Q8NH94 360 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 ERGIC1Q969X5 290 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 MEGF10Q96KG7 1140 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 ARV1Q9H2C2 271 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 GLS2Q9UI32 602 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 BOD1L1Q8NFC6 3051 aa11.88□□□□□ -0.51
LDB3-207ENST00000542786 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 ST8SIA3O43173 380 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 TNFSF12O43508 249 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 ZP3P21754 424 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 CD40P25942 277 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 P2RY1P47900 373 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 TMEM33P57088 247 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 AESQ08117 197 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 EIF4EBP1Q13541 118 aaPredicted RBP11.87□□□□□ -0.51
LDB3-207ENST00000542786 GFRALQ6UXV0 394 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 FAM90A1Q86YD7 464 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 ZNF695Q8IW36 515 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 TMED6Q8WW62 240 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
LDB3-207ENST00000542786 ABHD14BQ96IU4 210 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 HEATR1Q9H583 2144 aaKnown RBP11.87□□□□□ -0.51
LDB3-207ENST00000542786 ZFP57Q9NU63 452 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 PLA2G2EQ9NZK7 142 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 DUSP13Q9UII6 198 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 SPEF1Q9Y4P9 236 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 PTPRQQ9UMZ3 2332 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 ADAM20O43506 726 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 GPR137BO60478 399 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 GFRA3O60609 400 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 PITX3O75364 302 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 LHBP01229 141 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 IGKV1-39P01597 117 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 IGKV1D-39P04432 117 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 PSG2P11465 335 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 VDAC1P21796 283 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 MST1LQ2TV78 715 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 GPR157Q5UAW9 335 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 CCDC28AQ8IWP9 274 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 C5orf30Q96GV9 206 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
LDB3-207ENST00000542786 WFDC1Q9HC57 220 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 ELOVL5Q9NYP7 299 aa11.87□□□□□ -0.51
LDB3-207ENST00000542786 GATA4P43694 442 aa11.86□□□□□ -0.51
LDB3-207ENST00000542786 FAM53AQ6NSI3 398 aaPredicted RBP11.86□□□□□ -0.51
LDB3-207ENST00000542786 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
LDB3-207ENST00000542786 SPIN2AQ99865 258 aa11.86□□□□□ -0.51
LDB3-207ENST00000542786 SPIN2BQ9BPZ2 258 aa11.86□□□□□ -0.51
LDB3-207ENST00000542786 ASF1BQ9NVP2 202 aa11.86□□□□□ -0.51
LDB3-207ENST00000542786 OOEPA6NGQ2 149 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 HBZP02008 142 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 THBDP07204 575 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 PRDX2P32119 198 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 CEACAM6P40199 344 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 GLIPR1P48060 266 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 RPS23P62266 143 aaKnown RBP11.85□□□□□ -0.51
LDB3-207ENST00000542786 ID3Q02535 119 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 GNMTQ14749 295 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms