RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 SHISA8B8ZZ34 492 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 RPL36A-HNRNPH2H7BZ11 118 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 J3QR06 171 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 LYZL2Q7Z4W2 148 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
TRPM1-203ENST00000542188 OR6X1Q8NH79 312 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 NEUROG1Q92886 237 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 GPR35Q9HC97 309 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 PXMP4Q9Y6I8 212 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 IGKV3-7A0A075B6H7 116 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 SHISA7A6NL88 538 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 PSG9Q00887 426 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 KCNE5Q9UJ90 142 aa12.39□□□□□ -0.43
TRPM1-203ENST00000542188 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 TMPRSS2O15393 492 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 GHRHP01286 108 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 GAPDHP04406 335 aaKnown RBP12.38□□□□□ -0.43
TRPM1-203ENST00000542188 CCDC144NLQ6NUI1 221 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 ZNF418Q8TF45 676 aaPredicted RBP12.38□□□□□ -0.43
TRPM1-203ENST00000542188 WNT5BQ9H1J7 359 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 A0A1B0GWB2 263 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 SOCS1O15524 211 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 RNFT1Q5M7Z0 435 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 LDLRAD1Q5T700 205 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 CBLN4Q9NTU7 201 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 RNF7Q9UBF6 113 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 PSG2P11465 335 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 HIST1H1AQ02539 215 aaPredicted RBP12.38□□□□□ -0.43
TRPM1-203ENST00000542188 BHLHA15Q7RTS1 189 aaPredicted RBP12.38□□□□□ -0.43
TRPM1-203ENST00000542188 SOSTQ9BQB4 213 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 LTN1O94822 1766 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 FFAR1O14842 300 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 WNT9BO14905 357 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 RNF122Q9H9V4 155 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
TRPM1-203ENST00000542188 A0A1W2PR80 420 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 RECKO95980 971 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 CD3EP07766 207 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 LOXL3P58215 753 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 SLC35B1P78383 322 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 NKG7Q16617 165 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 PGLYRP4Q96LB8 373 aa12.38□□□□□ -0.43
TRPM1-203ENST00000542188 MRM2Q9UI43 246 aaKnown RBP12.38□□□□□ -0.43
TRPM1-203ENST00000542188 NDUFB4O95168 129 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 IGHV3-13P01766 116 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 IGHV3-7P01780 117 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 ANOS1P23352 680 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 NOVP48745 357 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 HMGA2P52926 109 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 GFRA1P56159 465 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 LSM6P62312 80 aaKnown RBP12.37□□□□□ -0.43
TRPM1-203ENST00000542188 B4GALNT1Q00973 533 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 TNFRSF12AQ9NP84 129 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 HPRT1P00492 218 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 MDKP21741 143 aaPredicted RBP12.37□□□□□ -0.43
TRPM1-203ENST00000542188 C1QTNF12Q5T7M4 302 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 ZNF793Q6ZN11 406 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 ZNF600Q6ZNG1 722 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 TCF23Q7RTU1 214 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 NIT1Q86X76 327 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 PTPMT1Q8WUK0 201 aaPredicted RBP12.37□□□□□ -0.43
TRPM1-203ENST00000542188 MYH13Q9UKX3 1938 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 FCARP24071 287 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 TRA2AQ13595 282 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRPM1-203ENST00000542188 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 LINC00518Q8N0U6 118 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 TUBD1Q9UJT1 453 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 ANKRD37Q7Z713 158 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 AKAP12Q02952 1782 aa12.37□□□□□ -0.43
TRPM1-203ENST00000542188 TRGC1P0CF51 173 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 PRR35P0CG20 571 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 SELENOTP62341 195 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 TM4SF20Q53R12 229 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 HCSTQ9UBK5 93 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 PHLDA3Q9Y5J5 127 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 A0A1B0GTH9 108 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 SLC17A3O00476 420 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 SRD5A2P31213 254 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 GFERP55789 205 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 CISD1Q9NZ45 108 aaKnown RBP12.36□□□□□ -0.43
TRPM1-203ENST00000542188 HKR1P10072 659 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 OR5A1Q8NGJ0 315 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 MEX3AA1L020 520 aaKnown RBP12.36□□□□□ -0.43
TRPM1-203ENST00000542188 CCL7P80098 99 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 DDB2Q92466 427 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 SF3B5Q9BWJ5 86 aaKnown RBP12.36□□□□□ -0.43
TRPM1-203ENST00000542188 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 J3QT63 122 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 TYMSP04818 313 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 ECSCRQ19T08 205 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 Q5PR19 223 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
TRPM1-203ENST00000542188 OR11H2Q8NH07 326 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms